Query= PFD1055w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal
protein S19s, putative
(170 letters)
>YNL302C RPS19B SGDID:S000005246, Chr XIV from
62943-62924,62372-61958, reverse complement, Verified
ORF, "Protein component of the small (40S) ribosomal
subunit; nearly identical to Rps19Ap and has similarity
to rat S19 ribosomal protein"
Length = 144
Score = 92.4 bits (228), Expect = 3e-24
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Query: 29 IKDVDADLFIRSYATHLKLHNKITYPKWCTFVKTGKGRKLAPLN-EDWYFIRASSILRRL 87
++DV A FI +YA+ L+ K+ P + VKT G ++ P + E W++ RA+S+ R +
Sbjct: 6 VRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHI 65
Query: 88 YLHPDIGVGFLRRQFSSKQRRGVAPNHTSLASGKILRSILQQLENLGYVEQNPKKKGRRL 147
Y+ +GVG L + + + RGV P ASG I R +LQ LE +G VE +P K GRR+
Sbjct: 66 YMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISP-KGGRRI 124
Query: 148 TTKGENAINNFA 159
+ G+ ++ A
Sbjct: 125 SENGQRDLDRIA 136
Lambda K H
0.321 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 144
Length adjustment: 17
Effective length of query: 153
Effective length of database: 127
Effective search space: 19431
Effective search space used: 19431
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.7 bits)
S2: 17 (11.2 bits)