Query= PFD1130w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(362 letters)
>YBR163W DEM1 SGDID:S000000367, Chr II from 565718-567475, Verified
ORF, "Protein of unknown function, shows similarity to
RNA-processing protein Pta1p"
Length = 585
Score = 35.4 bits (80), Expect = 4e-06
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 134 HRFYSNDGKEYNNSEITISDYILKDKLLSSYVSLPLKIENREYFLICGVSPYKFKDDNKK 193
H + ND K N ++T + +L D+ +S+ ++P++ +D++
Sbjct: 409 HSAFDNDAKGSNTFDMTAFNDLL-DRGPTSF-NVPIE-----------------QDEDSS 449
Query: 194 DDILCMASHDKGE---TWGTKIVIKYDNYKLGVQYFFLRPYISKNDLSFHFYVGDNINNV 250
+ C++ D G W T + +KY +L YF + +S + + ++Y DN +N+
Sbjct: 450 ESTKCVSLRDYGHFYTKWKTPLTLKYFAARLSQIYFIVGNLVSNDLMIEYYYHNDNFHNI 509
Score = 16.9 bits (32), Expect = 1.4
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 145 NNSEITISDYILKDKLLSSYVSLPLKIEN 173
+N+EI ISD +K + + S+ IE+
Sbjct: 312 SNNEIVISD--IKTRSVPKIPSIESVIES 338
Score = 16.5 bits (31), Expect = 1.9
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 259 THEKDLEFVCSNRDFLKDNKVLQDVSTLNDEYIVSYGNDNN 299
TH + ++ +FL K+ D+ D + ++ N N
Sbjct: 179 THPELNQYKSFTHNFLALTKLSMDIDNDMDALLDNWFNSIN 219
Score = 16.5 bits (31), Expect = 1.9
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 212 IVIKYDNYKLG 222
I+ YD KLG
Sbjct: 509 IIFPYDPLKLG 519
Score = 16.2 bits (30), Expect = 2.5
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 28 CDSRHV 33
CD RHV
Sbjct: 552 CDYRHV 557
Score = 15.4 bits (28), Expect = 4.2
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 265 EFVCSNRDFLKDNKVLQ 281
E VC L+D K+++
Sbjct: 234 EIVCHGFINLEDGKLVE 250
Lambda K H
0.323 0.141 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 578
Number of extensions: 37
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 362
Length of database: 585
Length adjustment: 33
Effective length of query: 329
Effective length of database: 552
Effective search space: 181608
Effective search space used: 181608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.5 bits)
S2: 25 (14.2 bits)