Query= PFD1130w Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein (362 letters)
>YBR163W DEM1 SGDID:S000000367, Chr II from 565718-567475, Verified
           ORF, "Protein of unknown function, shows similarity to
           RNA-processing protein Pta1p"
          Length = 585

 Score = 35.4 bits (80), Expect = 4e-06
 Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 22/120 (18%)

Query: 134 HRFYSNDGKEYNNSEITISDYILKDKLLSSYVSLPLKIENREYFLICGVSPYKFKDDNKK 193
           H  + ND K  N  ++T  + +L D+  +S+ ++P++                 +D++  
Sbjct: 409 HSAFDNDAKGSNTFDMTAFNDLL-DRGPTSF-NVPIE-----------------QDEDSS 449

Query: 194 DDILCMASHDKGE---TWGTKIVIKYDNYKLGVQYFFLRPYISKNDLSFHFYVGDNINNV 250
           +   C++  D G     W T + +KY   +L   YF +   +S + +  ++Y  DN +N+
Sbjct: 450 ESTKCVSLRDYGHFYTKWKTPLTLKYFAARLSQIYFIVGNLVSNDLMIEYYYHNDNFHNI 509

 Score = 16.9 bits (32), Expect = 1.4
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 145 NNSEITISDYILKDKLLSSYVSLPLKIEN 173
           +N+EI ISD  +K + +    S+   IE+
Sbjct: 312 SNNEIVISD--IKTRSVPKIPSIESVIES 338

 Score = 16.5 bits (31), Expect = 1.9
 Identities = 9/41 (21%), Positives = 18/41 (43%)

Query: 259 THEKDLEFVCSNRDFLKDNKVLQDVSTLNDEYIVSYGNDNN 299
           TH +  ++     +FL   K+  D+    D  + ++ N  N
Sbjct: 179 THPELNQYKSFTHNFLALTKLSMDIDNDMDALLDNWFNSIN 219

 Score = 16.5 bits (31), Expect = 1.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)

Query: 212 IVIKYDNYKLG 222
           I+  YD  KLG
Sbjct: 509 IIFPYDPLKLG 519

 Score = 16.2 bits (30), Expect = 2.5
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 28  CDSRHV 33
           CD RHV
Sbjct: 552 CDYRHV 557

 Score = 15.4 bits (28), Expect = 4.2
 Identities = 6/17 (35%), Positives = 10/17 (58%)

Query: 265 EFVCSNRDFLKDNKVLQ 281
           E VC     L+D K+++
Sbjct: 234 EIVCHGFINLEDGKLVE 250
Lambda     K      H
   0.323    0.141    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 578
Number of extensions: 37
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 362
Length of database: 585
Length adjustment: 33
Effective length of query: 329
Effective length of database: 552
Effective search space:   181608
Effective search space used:   181608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.5 bits)
S2: 25 (14.2 bits)