Query= PFE0135w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(137 letters)
>YOR254C SEC63 SGDID:S000005780, Chr XV from 807024-805033, reverse
complement, Verified ORF, "Essential subunit of Sec63
complex (Sec63p, Sec62p, Sec66p and Sec72p); with Sec61
complex, Kar2p/BiP and Lhs1p forms a channel competent
for SRP-dependent and post-translational SRP-independent
protein targeting and import into the ER"
Length = 663
Score = 44.7 bits (104), Expect = 3e-09
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 4 DPYLILNVEKNCDIETVKKQFKKLAVIYHPDKLKHNLIKEKSDEKNTID--FVTLIWAYE 61
DPY IL + + +K ++KL+V +HPDKL L DEK+ ++ +V + AYE
Sbjct: 125 DPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGL---TPDEKSVMEETYVQITKAYE 181
Query: 62 EILKNIQNQN 71
+ + QN
Sbjct: 182 SLTDELVRQN 191
Score = 16.5 bits (31), Expect = 0.74
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 61 EEILKNIQNQNNNTCISQ 78
EE+ KN+ + + I Q
Sbjct: 56 EEVFKNLNEEYTSDEIKQ 73
Score = 13.9 bits (24), Expect = 4.8
Identities = 4/4 (100%), Positives = 4/4 (100%)
Query: 107 GDFF 110
GDFF
Sbjct: 584 GDFF 587
Score = 13.1 bits (22), Expect = 8.2
Identities = 4/8 (50%), Positives = 5/8 (62%)
Query: 108 DFFIFNEN 115
DF + EN
Sbjct: 434 DFLVPGEN 441
Lambda K H
0.322 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 239
Number of extensions: 14
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 137
Length of database: 663
Length adjustment: 26
Effective length of query: 111
Effective length of database: 637
Effective search space: 70707
Effective search space used: 70707
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.1 bits)
S2: 22 (13.1 bits)