Query= PFE0150c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
4-diphosphocytidyl-2c-methyl-D-erythritol kinase (CMK), putative
(537 letters)
>YLR149C YLR149C SGDID:S000004139, Chr XII from 439824-437632,
reverse complement, Uncharacterized ORF, "Hypothetical
protein"
Length = 730
Score = 33.5 bits (75), Expect = 3e-05
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 377 VYKNVDYKRIIQYNPVNLLKCLINTSNDDXXXXXXXXXXXFANTFISLDNRDNLQ----- 431
+ KN+ + Y+ N+ K ++ N + F N ++L +R ++Q
Sbjct: 180 ISKNISFPINSHYSNPNIWKGIVEFYNQETDTMMTFTLGQFINNCVTLYDRASMQFDLFA 239
Query: 432 -----NVFVNDLEHSAFYLIKKLQDLKEYLRSQNM-FDVVSMSGSG-SSLFALSNKKTQT 484
+++ D+ + L+K+ DLK L + ++ D +M SG S+ FA+ N+ T
Sbjct: 240 CNNDGHLYQCDVSNRDVTLVKRYADLKFPLNNASLSHDGQTMVVSGDSNKFAVYNQNELT 299
Query: 485 HEISSSFQN 493
++ S + N
Sbjct: 300 NQFSLHYDN 308
Score = 18.9 bits (37), Expect = 0.73
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 122 VLDNRNNWYDSKYFSPAKINLFLRLKEKKETYNEVSTLMHSLNLGDD 168
V+D RN P K+N+ + K T + +T ++ N +D
Sbjct: 418 VVDTRNYVNHQVIVIPDKVNMEYINERKHNTNHNFTTNNNNENESND 464
Lambda K H
0.322 0.140 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 797
Number of extensions: 39
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 537
Length of database: 730
Length adjustment: 38
Effective length of query: 499
Effective length of database: 692
Effective search space: 345308
Effective search space used: 345308
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)