Query= PFE0185c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
subunit protein L31, putative
(120 letters)
>YLR406C RPL31B SGDID:S000004398, Chr XII from
931754-931698,931348-931064, reverse complement,
Verified ORF, "Protein component of the large (60S)
ribosomal subunit, nearly identical to Rpl31Ap and has
similarity to rat L31 ribosomal protein; associates with
the karyopherin Sxm1p"
Length = 113
Score = 94.0 bits (232), Expect = 5e-25
Identities = 46/92 (50%), Positives = 66/92 (71%)
Query: 21 TINLSKLTHKVCYKRKAPRAIKEIRSIAGKLMHTKDVRLDVKLNKFIWSKGVRNPPKRVR 80
TINL K H V +K++APRA+KEI+ A M T+DVRL +LN+ IW +GV+ R+R
Sbjct: 13 TINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTEDVRLAPELNQAIWKRGVKGVEYRLR 72
Query: 81 VKLERKRNEDEDSKEKMYTIVEHVMVDSYKGL 112
+++ RKRNE+ED+K +++ VE V+V S KGL
Sbjct: 73 LRISRKRNEEEDAKNPLFSYVEPVLVASAKGL 104
Lambda K H
0.318 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 120
Length of database: 113
Length adjustment: 13
Effective length of query: 107
Effective length of database: 100
Effective search space: 10700
Effective search space used: 10700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 15 ( 9.8 bits)
S2: 15 (10.4 bits)