Query= PFE0270c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) DNA repair
protein, putative
(1350 letters)
>FBgn0036486 type=protein;
loc=3L:complement(15147765..15147911,15147972..15148457,
15148526..15150133,15150198..15150527,
15150586..15151587); ID=FBpp0075399; name=CG7003-PA;
parent=FBgn0036486,FBtr0075646;
dbxref=FlyBase:FBpp0075399,
FlyBase_Annotation_IDs:CG7003-PA,GB_protein:AAF49656.2,
GB_protein:AAF49656;
MD5=015273798dbb29ad203dd6e7f67df71a; release=r5.1;
species=Dmel; length=1190;
Length = 1190
Score = 285 bits (729), Expect = 2e-80
Identities = 203/644 (31%), Positives = 314/644 (48%), Gaps = 61/644 (9%)
Query: 732 RETYMVLDATALKHLEILETQSGDTKNSLYDYVNKTCTNFGARNLRRWICSPLLDCEKIR 791
R ++MVLDAT L +L I+ + +SL ++ CT FG R L W+C+P D I+
Sbjct: 575 RRSHMVLDATTLSNLRIIGEE-----HSLLSTLDHCCTKFGKRLLHHWLCAPSCDVSVIK 629
Query: 792 ERLDVVDFLKNNEQILSLIRMKLKKLPDIERLL-------NKICIQASQSERGAVFFDNV 844
ER D + L L +R L +PD ER L NK Q + A+ F+
Sbjct: 630 ERQDAIGELIRMPTELQEVRALLAPMPDFERNLAQIHLFGNKQIKQMDHPDSRAILFEEK 689
Query: 845 V--NTKLKEFVTFLNAFKEIDTMLIDVNRIERDGELPSRLFQICNTPDICK----DNIKG 898
+ KL+ F+ L F ++ +LP+ +F C T + + G
Sbjct: 690 LYNKQKLQGFMAVLKGFNDLT-------------KLPT-MFHQCKTTLLKRITQLPESGG 735
Query: 899 SYPNIGLITNEFLEKIYFDGDKEYK-----PAEGCDEDIDKIXXXXXXXXXXXXXXXXHM 953
S+P++ F FD D K P G D + D
Sbjct: 736 SFPDLSKELQYFATA--FDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEVEKRLKTYLVEQ 793
Query: 954 RTQLKIPTLKFVHAKFKYEVECPDNIPKSFLKNVEI---TSAKKGYVRIHNDEIKSLVEK 1010
F K +Y+++ P++ K+ + T KK R E ++L++
Sbjct: 794 ERHFGCRITYFGSDKKRYQLDVPESHASKANKSYTLEGQTKGKKPSRRYTTAETRALLKD 853
Query: 1011 LEDIEQEKKDAIYPFFQKLFHLFYAHYEKYVSACRLVAELDCLQSFAYVVLNTAFPLTRP 1070
++ E + + ++LF F HY+++ VA LD L S A
Sbjct: 854 MQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVLGSLAEYAGQQMVICVPE 913
Query: 1071 ILHPMDSKQGEEKTPFLILEDNIHPVVAMLMPNFISNNIYMGCDKEKQSTLLLTGPNMGG 1130
++ D PF+ LE+ HP +I N + +G E +LL TGPNMGG
Sbjct: 914 LVSDADQ-------PFIQLEEGYHPCANA--STYIPNGLELGTASEAPLSLL-TGPNMGG 963
Query: 1131 KSTLLRQTAISVILAQIGAFVPCTYCELTVVDKIFTRLGSSDNLFEGKSTFLVELEDISN 1190
KSTL+R+ + VI+AQIGA +P C L++VD+IFTRLG+ D++ G STFLVEL + S
Sbjct: 964 KSTLMREVGLLVIMAQIGAHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNETSL 1023
Query: 1191 LLKQSTKYSLAILDELGRGTSSFDGTAIALSTLEQISDVIKCRCIFSTHYHLLVEEVKHN 1250
+LK +T +SL +LDELGRGT+++DGTAIA S + +++ +KCR +FSTHYH L++ ++
Sbjct: 1024 ILKHATCHSLVLLDELGRGTATYDGTAIAASVVNFLAN-LKCRTLFSTHYHNLIDFFHND 1082
Query: 1251 KNISNYHMSLSIDDE------QEKIIFLYKFIKGVCPKSFGIHIAKLAGLPKEIIDLAHE 1304
K I+ HM+ +++E QE + FLYK+ G CPKS+G + AKLAG+P+ II A+E
Sbjct: 1083 KRITLGHMACMVENEDNADPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYE 1142
Query: 1305 KSLLFENVTDEFCKIIKYKNITRSLLNEEADEKLVTLFHKYKKE 1348
S E + + + I K + + NE+ ++ + K+
Sbjct: 1143 LSKKVEAIALQ--RKITAKIVAATAGNEDTKKEKINALKDLLKQ 1184
Score = 106 bits (264), Expect = 1e-26
Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 10/159 (6%)
Query: 362 KWIQPQYIRDINLRTPDHADYDSSTIWTPPPDHKWAIEYKQAHYTPGMQQFWKIKSRNFD 421
+++QP I+D R PDH DYD ST+ P E +PG++Q+W +KS N+D
Sbjct: 226 EFLQPDKIKDKEGRRPDHPDYDKSTLHVP--------EKFLNGLSPGVRQWWVLKSDNYD 277
Query: 422 KIIFFKMGRFYEIFYIDACLMHTICSLNWMSGEHKPHLGFPEQSLHFYAKKVINSGHKVV 481
++FFK+G+FYE++++DA + +M GE H GFPE S + +++ G KV
Sbjct: 278 CVLFFKVGKFYELYHMDADVGVNELGFTYMRGEF-AHSGFPEISFDKMSTILVDRGFKVA 336
Query: 482 VIEQMETPKELEQRNKESIGPK-DKAIKREINEIYTKGT 519
+EQ ETP + +R K K DK + REI +I +GT
Sbjct: 337 RVEQTETPDMMTERCKRIKATKFDKVVAREICQITNRGT 375
Score = 20.8 bits (42), Expect = 0.82
Identities = 15/80 (18%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 43 QNEINNNVPEKRKSGDDKSGVDSKNKNEKENLGSNKKINMLDMF-LSKGEMYNK--PKII 99
+N+++ + P +KS +++ N NE S+KK+ + L++G + + +
Sbjct: 140 ENDMSVDSPTPKKSRKKSKILNNNNNNEP----SSKKVKLESTIQLAEGATFQEKLKNLQ 195
Query: 100 DNINKEPINGDMLSTDKNMN 119
N ++ D+++ N++
Sbjct: 196 SNAKQDASYDDIVTNTSNLD 215
Score = 17.3 bits (33), Expect = 9.1
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 75 GSNKKINMLDMFLSKGEMYNKPKIIDNINK 104
GS+KK LD+ S NK ++ K
Sbjct: 805 GSDKKRYQLDVPESHASKANKSYTLEGQTK 834
Lambda K H
0.318 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3376
Number of extensions: 149
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 1350
Length of database: 1190
Length adjustment: 48
Effective length of query: 1302
Effective length of database: 1142
Effective search space: 1486884
Effective search space used: 1486884
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 33 (18.0 bits)
S2: 33 (17.3 bits)