Query= PFE0285c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
ubiquitin-like protein, putative
(100 letters)
>YDR510W SMT3 SGDID:S000002918, Chr IV from 1469391-1469696,
Verified ORF, "Ubiquitin-like protein of the SUMO
family, conjugated to lysine residues of target
proteins; regulates chromatid cohesion, chromosome
segregation, APC-mediated proteolysis, DNA replication
and septin ring dynamics"
Length = 101
Score = 85.5 bits (210), Expect = 1e-22
Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Query: 5 DSAVNNNGSSPVNNQGE---HIQVKVRSPDGAEVFFKIKRKTKLEKLMEVYCNRLGQSME 61
DS VN V + + HI +KV S +E+FFKIK+ T L +LME + R G+ M+
Sbjct: 3 DSEVNQEAKPEVKPEVKPETHINLKV-SDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMD 61
Query: 62 AVRFLYDGDRIHGDNTPEQLGIEDGDVIDAMVQQTGGS 99
++RFLYDG RI D TPE L +ED D+I+A +Q GG+
Sbjct: 62 SLRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGGA 99
Lambda K H
0.314 0.135 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 100
Length of database: 101
Length adjustment: 11
Effective length of query: 89
Effective length of database: 90
Effective search space: 8010
Effective search space used: 8010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.2 bits)
S2: 14 (10.0 bits)