Query= PFE0515w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(439 letters)
>YOL022C YOL022C SGDID:S000005382, Chr XV from 281499-280273,
reverse complement, Uncharacterized ORF, "Protein
required for cell viability"
Length = 408
Score = 37.4 bits (85), Expect = 9e-07
Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 45/175 (25%)
Query: 16 LKNDSKFGGEPIWIH-DKEPTNLNLKCSICKK--DLTFLFQLSTSYDE------------ 60
L DS GGEP W+H D EP LKC CK ++ L Q + D+
Sbjct: 40 LVEDSFIGGEPKWLHPDSEPPAELLKCGACKSADNMKLLLQAFSPLDDEQMSAIQQRLGI 99
Query: 61 ----YI-----RVLYLFXXXXXXXXXXXXXXWVCIKGKQK------LVYELTNNDIQKN- 104
YI RVLY+F CI+G +K L ++ + ++K+
Sbjct: 100 NNMSYINPQDDRVLYVFLCTECQRKGNSVR---CIRGVKKNKNVDSLSEKMASTSLEKDF 156
Query: 105 --NNMDESINMEKKNNGNLIYDNNYKGNNTFSIFSNENIKKEDSILENLNSREEK 157
N D S N + K N + +N G +N N DSI N++ +++
Sbjct: 157 QINPFDLSNNSDSKCNA---FSSNPFGG------ANANPFGADSINSNISQSKDE 202
Score = 26.9 bits (58), Expect = 0.001
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 329 KFYSYLSKNYNQILRYSYNGKFLYMFKSTKTNIKQKNMICSH-CKHKLVFELQLFSTFIY 387
KF + N Q+LRY GK L ++ TK +I + + +FE+QL I+
Sbjct: 300 KFQEVVGYNPLQVLRYDLGGKPL-LYAETKVDILSTVPRPGYNPSSQRIFEMQLMPKMIF 358
Query: 388 QIEK 391
+E+
Sbjct: 359 DLEE 362
Score = 20.0 bits (40), Expect = 0.14
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 5 ELSNEIDNKFDLKNDSKFGG 24
+LSN D+K + + + FGG
Sbjct: 162 DLSNNSDSKCNAFSSNPFGG 181
Score = 16.9 bits (32), Expect = 1.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 12 NKFDLKNDS 20
N FDL N+S
Sbjct: 159 NPFDLSNNS 167
Score = 15.4 bits (28), Expect = 3.6
Identities = 6/36 (16%), Positives = 14/36 (38%)
Query: 219 NCDAIKSNNGDNNKKELDKCNDITLETLKSNNCNNY 254
N D++ + ++ + N L + CN +
Sbjct: 139 NVDSLSEKMASTSLEKDFQINPFDLSNNSDSKCNAF 174
Score = 14.6 bits (26), Expect = 6.1
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 226 NNGDNNKKELDKCNDITLETLKSNNCNNY 254
N D + KCN + N N +
Sbjct: 159 NPFDLSNNSDSKCNAFSSNPFGGANANPF 187
Lambda K H
0.317 0.136 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 459
Number of extensions: 34
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 6
Length of query: 439
Length of database: 408
Length adjustment: 32
Effective length of query: 407
Effective length of database: 376
Effective search space: 153032
Effective search space used: 153032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)
S2: 25 (14.2 bits)