>YFL038C YPT1 SGDID:S000001856, Chr VI from 55985-55365, reverse
           complement, Verified ORF, "Ras-like small GTPase,
           involved in the ER-to-Golgi step of the secretory
           pathway; complex formation with the Rab escort protein
           Mrs6p is required for prenylation of Ypt1p by protein
           geranylgeranyltransferase type II (Bet2p-Bet4p)"
          Length = 206

 Score =  232 bits (591), Expect = 4e-66
 Identities = 119/206 (57%), Positives = 145/206 (70%), Gaps = 6/206 (2%)

Query: 1   MNDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFXXXXXXXXXXXXXLQ 60
           MN  YD LFK+LLIG+SGVGKSCLLLRF+DDTYT+ YISTIGVDF             LQ
Sbjct: 1   MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKILIG 120
           IWDTAGQERFRTITSSYYRG+ GIIIVYDVTD++SFN VK W+ EI++YA+  V K+L+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVG 120

Query: 121 NKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAYEIKNKSQHETIN- 179
           NK DLK+ R V Y+  KE AD+  + FLETSA  + NVE AF TMA +IK     + +N 
Sbjct: 121 NKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNE 180

Query: 180 -----KGKTNINLNARPIKDTKKKCC 200
                + K N+NL  + + +T   CC
Sbjct: 181 TTQKKEDKGNVNLKGQSLTNTGGGCC 206

Lambda     K      H
   0.317    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 185
Number of extensions: 9
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 206
Length adjustment: 21
Effective length of query: 179
Effective length of database: 185
Effective search space:    33115
Effective search space used:    33115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.6 bits)
S2: 19 (11.9 bits)