Query= PFE0670w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(124 letters)
>YLR008C PAM18 SGDID:S000003998, Chr XII from 166082-165576, reverse
complement, Verified ORF, "Constituent of the
mitochondrial import motor associated with the
presequence translocase, along with Ssc1p, Tim44p,
Mge1p, and Pam16p; stimulates the ATPase activity of
Ssc1p to drive mitochondrial import; contains a J
domain"
Length = 168
Score = 37.4 bits (85), Expect = 9e-08
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 17/93 (18%)
Query: 29 AYREIIKN----KHNTHFIKEKYNPCMNIEEALNILNVDKTKIYKNLNKEELMSLKDEIT 84
AY+ I K K T F+K ++P MN +EAL ILN+ + + K KE
Sbjct: 82 AYKSISKGLNGGKSTTAFLKGGFDPKMNSKEALQILNLTENTLTKKKLKE---------V 132
Query: 85 NRHLILNKLNEKNGPYNGSAYIQKKARIAKDIL 117
+R ++L +K GS ++ K AKD L
Sbjct: 133 HRKIMLANHPDK----GGSPFLATKINEAKDFL 161
Lambda K H
0.321 0.137 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 168
Length adjustment: 16
Effective length of query: 108
Effective length of database: 152
Effective search space: 16416
Effective search space used: 16416
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.3 bits)
S2: 16 (10.8 bits)