Query= PFE0845c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
subunit protein L8, putative
(260 letters)
>FBgn0024939 type=protein;
loc=3L:join(2587753..2587890,2588084..2588716);
ID=FBpp0072802; name=RpL8-PB;
parent=FBgn0024939,FBtr0072925;
dbxref=FlyBase:FBpp0072802,
FlyBase_Annotation_IDs:CG1263-PB,GB_protein:AAF47660.1,
GB_protein:AAF47660;
MD5=d09e64c3a15edc7f30e4ac2fa02ce592; release=r5.1;
species=Dmel; length=256;
Length = 256
Score = 338 bits (866), Expect = 9e-98
Identities = 162/250 (64%), Positives = 193/250 (77%)
Query: 1 MGRVIRGQRKGRGSIFKSHNHHRKGAAKLRHLDYCEKKGYIKGLVKDIIHDPGRGAPLAK 60
MGRVIR QRKG GS+FK+H RKGAAKLR LD+ E+ GYI+G+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 61 VIFKRTEKYGKKEELIIASEGMFTGQYISCGTKAPLSVGNILPIGKMPEGTLICNLEHRT 120
V F+ +Y ++EL IA EGM TGQ++ CG KA L +GN++P+ +MPEGT+ICNLE +T
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 121 GNRGTLVKASGCYATVVGQSEDGKKTKVRLPSGAKKTIDXXXXXXXXXXXXXXRIDKPIL 180
G+RG L + SG YATV+ ++D KKT+V+LPSGAKK + RIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 181 KAGVAHHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHPSTVSRSAPAGQKVGLIAA 240
KAG A+HKY+VKRN WPKVRGVAMNPVEHPHGGGNHQHIG STV R AG+KVGLIAA
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
Query: 241 RRTGLLRGAK 250
RRTG +RG K
Sbjct: 241 RRTGRIRGGK 250
Score = 16.9 bits (32), Expect = 0.44
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 225 VSRSAPAGQKVGLIAARRTGLLRGAKK 251
V + A + L A R+G +RG K
Sbjct: 20 VKKRKGAAKLRSLDFAERSGYIRGVVK 46
Lambda K H
0.317 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 346
Number of extensions: 13
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 260
Length of database: 256
Length adjustment: 24
Effective length of query: 236
Effective length of database: 232
Effective search space: 54752
Effective search space used: 54752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)