>YFR031C-A RPL2A SGDID:S000002104, Chr VI from
           221406-221403,221255-220495, reverse complement,
           Verified ORF, "Protein component of the large (60S)
           ribosomal subunit, identical to Rpl2Bp and has
           similarity to E. coli L2 and rat L8 ribosomal proteins"
          Length = 254

 Score =  330 bits (847), Expect = 1e-95
 Identities = 158/253 (62%), Positives = 193/253 (76%)

Query: 1   MGRVIRGQRKGRGSIFKSHNHHRKGAAKLRHLDYCEKKGYIKGLVKDIIHDPGRGAPLAK 60
           MGRVIR QRKG GSIF SH   R+GAAKLR LDY E+ GYI+G+VK I+HD GRGAPLAK
Sbjct: 1   MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAK 60

Query: 61  VIFKRTEKYGKKEELIIASEGMFTGQYISCGTKAPLSVGNILPIGKMPEGTLICNLEHRT 120
           V+F+   KY  +EE+ IA+EG+ TGQ+I  G KA L+VGN+LP+G +PEGT++ N+E + 
Sbjct: 61  VVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120

Query: 121 GNRGTLVKASGCYATVVGQSEDGKKTKVRLPSGAKKTIDXXXXXXXXXXXXXXRIDKPIL 180
           G+RG L +ASG Y  ++G + D  KT+VRLPSGAKK I               R+DKP+L
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLL 180

Query: 181 KAGVAHHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHPSTVSRSAPAGQKVGLIAA 240
           KAG A HKYR+KRN WPK RGVAMNPV+HPHGGGNHQHIG  ST+SR A +GQK GLIAA
Sbjct: 181 KAGRAFHKYRLKRNSWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAA 240

Query: 241 RRTGLLRGAKKTK 253
           RRTGLLRG++KT+
Sbjct: 241 RRTGLLRGSQKTQ 253

Lambda     K      H
   0.317    0.137    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 337
Number of extensions: 13
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 254
Length adjustment: 24
Effective length of query: 236
Effective length of database: 230
Effective search space:    54280
Effective search space used:    54280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)