Query= PFE0915c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) proteasome
subunit beta type 1
(260 letters)
>FBgn0002284 type=protein;
loc=3L:complement(16602636..16603254,
16603330..16603418); ID=FBpp0075119; name=Pros26-PA;
parent=FBgn0002284,FBtr0075360;
dbxref=FlyBase:FBpp0075119,
FlyBase_Annotation_IDs:CG4097-PA,GB_protein:AAF49435.1,
GB_protein:AAF49435;
MD5=4b5675150c283e60863791308b0d6f4b; release=r5.1;
species=Dmel; length=235;
Length = 235
Score = 160 bits (406), Expect = 2e-44
Identities = 85/234 (36%), Positives = 134/234 (57%), Gaps = 27/234 (11%)
Query: 32 PYIDNGGTVIGLTGKDYVILAADTRLSLSYSIYTRFCPKISKLTDKCIIGSSGMQSDIKT 91
PY NGG+++ + G D+ ++AADTRLS Y+I++R K+ KL+ + ++GS+G +D +
Sbjct: 24 PYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLS 83
Query: 92 LHSLLQVKQRYKSGXXXXXXXXXXXXXXXQLFVLEHSHYPDI--HVIARLLCVILYSRRF 149
L ++V+ + EH+H + +A++L + +Y+RRF
Sbjct: 84 LTGSIKVRMQS----------------------YEHTHLRTMTTEAVAQMLSIAMYNRRF 121
Query: 150 FPYYAFNILAGVDENNKGVLYNYDSVGSYCEATHSCVGSGSQLILPILDNRVEQKNQLIK 209
FPYY NILAG+D KGV+Y+YD +G +AT+ G+ L+ P+LDN++ KN ++
Sbjct: 122 FPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLE 181
Query: 210 NTN---FNLGDDINFVKDAITSATERDIYTGDKTLIYVIDKMGINVNTLDLKQD 260
+ + ++ D SA ERDIYTGD LI +I K GI V TL L+QD
Sbjct: 182 DADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
Lambda K H
0.320 0.139 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 180
Number of extensions: 7
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 235
Length adjustment: 24
Effective length of query: 236
Effective length of database: 211
Effective search space: 49796
Effective search space used: 49796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.1 bits)
S2: 20 (12.3 bits)