Query= PFE0975c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
subunit protein S24, putative
(133 letters)
>YER074W RPS24A SGDID:S000000876, Chr V from
306319-306321,306788-307192, Verified ORF, "Protein
component of the small (40S) ribosomal subunit;
identical to Rps24Bp and has similarity to rat S24
ribosomal protein"
Length = 135
Score = 135 bits (339), Expect = 3e-37
Identities = 65/124 (52%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Query: 1 MTDQFTIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFG 60
M+D TIR +K +SNPLL RKQF +++LHPN+ +V+K E++E+LA++YK + + +FG
Sbjct: 1 MSDAVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKAEK-DAVSVFG 59
Query: 61 FKTLFGGGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVR 120
F+T FGGG++ GFGL+Y +V KKFE YRLVR GL +K KA R+ K+ KNR KK+
Sbjct: 60 FRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKKIF 119
Query: 121 GTEK 124
GT K
Sbjct: 120 GTGK 123
Lambda K H
0.318 0.135 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 88
Number of extensions: 5
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 133
Length of database: 135
Length adjustment: 15
Effective length of query: 118
Effective length of database: 120
Effective search space: 14160
Effective search space used: 14160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.2 bits)
S2: 16 (10.8 bits)