Query= PFE1005w Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal subunit protein S9, putative (189 letters)
>YPL081W RPS9A SGDID:S000006002, Chr XVI from
           404947-404953,405455-406041, Verified ORF, "Protein
           component of the small (40S) ribosomal subunit; nearly
           identical to Rps9Ap and has similarity to E. coli S4 and
           rat S9 ribosomal proteins"
          Length = 197

 Score =  248 bits (632), Expect = 6e-71
 Identities = 122/176 (69%), Positives = 148/176 (84%)

Query: 1   MPKSYRNYSKTARNPKRPFEKERLDQELKLIGEYGLKNKREIWRVQYLLAKIRSAARYLL 60
           MP++ R YSKT   PKRP+E  RLD ELKL GE+GLKNK+EI+R+ + L+KIR AAR LL
Sbjct: 1   MPRAPRTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLL 60

Query: 61  TLDEKSSKRIFQGEALLRRMVRQGLLGENEEKLDYVLGLTLPKLLERRLQTKVFKLGLAK 120
           T DEK  KR+F+G AL+RR+VR G+L E+++KLDYVL L +   LERRLQT+V+KLGLAK
Sbjct: 61  TRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAK 120

Query: 121 SVHHARVLIRQRHIRVGKQMVDIPSFLVRVDSEKHIDFATTSPFGGARPGRVKRKS 176
           SVHHARVLI QRHI VGKQ+V+IPSF+VR+DSEKHIDFA TSPFGGARPGRV R++
Sbjct: 121 SVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 176
Lambda     K      H
   0.322    0.138    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 155
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 197
Length adjustment: 20
Effective length of query: 169
Effective length of database: 177
Effective search space:    29913
Effective search space used:    29913
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)