Query= PFE1215c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
developmentally regulated GTP-binding protein 1, putative
(365 letters)
>YAL036C RBG1 SGDID:S000000034, Chr I from 76153-75044, reverse
complement, Verified ORF, "Member of the DRG family of
GTP-binding proteins; interacts with translating
ribosomes"
Length = 369
Score = 429 bits (1103), Expect = e-125
Identities = 212/365 (58%), Positives = 279/365 (76%), Gaps = 3/365 (0%)
Query: 4 LQKIADIEAEMAKTQKNKATNYHXXXXXXXXXXXXXXXIXXXXXXXXXXXX--FDVSKTG 61
++KI IE EMA+TQKNKAT++H + FDV++TG
Sbjct: 5 VEKIKAIEDEMARTQKNKATSFHLGQLKAKLAKLRRELLTSASSGSGGGAGIGFDVARTG 64
Query: 62 DARIGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCVPGIFKYKGAKMQLLDLPGIIE 121
A +G VGFPSVGKSTLL+KLTGT SE A YEFTTL VPG+ +YKGAK+Q+LDLPGII+
Sbjct: 65 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPGIID 124
Query: 122 GAKDGKGRGKQVIAVAKSCSLILIVLDVLKPLTYKKIIEKELEGFGIRLNKKPPNIIFQK 181
GAKDG+GRGKQVIAVA++C+L+ I+LDV KPL +K+IIEKELEG GIRLNK PP+I+ +K
Sbjct: 125 GAKDGRGRGKQVIAVARTCNLLFIILDVNKPLHHKQIIEKELEGVGIRLNKTPPDILIKK 184
Query: 182 KDKGGINITHTVPLNNLDEDMIKSICHEYRIINANISIRCEATVDDIIDVIE-GNRLYVP 240
K+KGGI+IT+TVPL +L D I+++ EYRI +A I+ RC+ATVDD+IDV+E +R Y+P
Sbjct: 185 KEKGGISITNTVPLTHLGNDEIRAVMSEYRINSAEIAFRCDATVDDLIDVLEASSRRYMP 244
Query: 241 CIYVLNKVDQITMEELNLVTKLPHNVPISAHLEWNLDGLLEAIWNYLDLVRIYTKPKGQI 300
IYVLNK+D +++EEL L+ ++P+ VPIS+ +WNLD LL+ +W+ L+LVRIYTKPKGQI
Sbjct: 245 AIYVLNKIDSLSIEELELLYRIPNAVPISSGQDWNLDELLQVMWDRLNLVRIYTKPKGQI 304
Query: 301 PDYESPVILKKEKCKVENFCKKIHRSLVQQLKYALVWGKSVKHNPQKVGKDHELNDEDVV 360
PD+ PV+L+ ++C V++FC +IH+SLV + ALV+G SVKH PQ VG H L DEDVV
Sbjct: 305 PDFTDPVVLRSDRCSVKDFCNQIHKSLVDDFRNALVYGSSVKHQPQYVGLSHILEDEDVV 364
Query: 361 QLVKK 365
++KK
Sbjct: 365 TILKK 369
Lambda K H
0.319 0.138 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 400
Number of extensions: 10
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 369
Length adjustment: 30
Effective length of query: 335
Effective length of database: 339
Effective search space: 113565
Effective search space used: 113565
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.9 bits)
S2: 24 (13.9 bits)