Query= PFE1240w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein, conserved
(988 letters)
>YPL207W YPL207W SGDID:S000006128, Chr XVI from 159908-162340,
Uncharacterized ORF, "Hypothetical protein"
Length = 810
Score = 392 bits (1008), Expect = e-113
Identities = 198/424 (46%), Positives = 277/424 (65%), Gaps = 21/424 (4%)
Query: 581 SETSSNQSYPDDEDEQIEVEDL--------ISG--EKKDMLS--SSQRNKLTKEGYKIVG 628
+++ ++ + DE +VED+ SG E K M++ S LTK+GYK++G
Sbjct: 377 ADSEEDEEEGNGSDELGDVEDIGGKGSNGKFSGADEIKQMVAKDSPTYKNLTKQGYKVIG 436
Query: 629 SHSAVKLCRWTKSQVRGRGGCYKHTFYGINSYQCMEATPSLACANKCVFCWRHHKNPVGV 688
SHS VK+CRWTK+++RG+G CYK + + I S +CME TPSLAC++KCVFCWRH NPV
Sbjct: 437 SHSGVKICRWTKNELRGKGSCYKKSLFNIASSRCMELTPSLACSSKCVFCWRHGTNPVSK 496
Query: 689 KWRWNMDXXXXXXXXXXXXXXAMIKELKGIYGIIMERFEKAMNIKHCALSLVGEPIMYPE 748
WRW +D +MIK+++G+ G+I ERF KA ++HCALSLVGEPI+YP
Sbjct: 497 NWRWEVDEPEYILENALKGHYSMIKQMRGVPGVIAERFAKAFEVRHCALSLVGEPILYPH 556
Query: 749 INKLIDELHKRNISTFLVTNAQFPQELENLNTVTQLYLSIDAPNKEALKNIDRPLFKDFW 808
INK I LH++ I++FLV NAQ P+ L N+ VTQLY+SIDAP K LK +DRPL+KDFW
Sbjct: 557 INKFIQLLHQKGITSFLVCNAQHPEALRNIVKVTQLYVSIDAPTKTELKKVDRPLYKDFW 616
Query: 809 DRYIKCIKILK--NRKERKVFRFTLVKEYNMMENEIDSYINLIQLGYPDFIEIKAVTYCG 866
+R ++C++ILK +R VFR TLVK +NM ++ +Y +L+Q G P FIE+K T+ G
Sbjct: 617 ERMVECLEILKTVQNHQRTVFRLTLVKGFNM--GDVSAYADLVQRGLPGFIEVKGATFSG 674
Query: 867 SS--QGYQLTMQNIPWHEEVYQFAWNLINKKKALSHIYEISCEHKHSCSILITKKIFKIN 924
SS G LTMQNIP++EE +F + + Y+++ EH HS +LI FKIN
Sbjct: 675 SSDGNGNPLTMQNIPFYEECVKFVKAFTTELQRRGLHYDLAAEHAHSNCLLIADTKFKIN 734
Query: 925 NKWNTWIDYEKFHQLVKNKENFNALDYSVETPHWAIYGSQESGFSPCEKRVYTKGKYK-N 983
+W+T ID++KF L+ + ++F +DY +TP WA++G+ GF+P RVY K K K N
Sbjct: 735 GEWHTHIDFDKFFVLLNSGKDFTYMDYLEKTPEWALFGN--GGFAPGNTRVYRKDKKKQN 792
Query: 984 KNQQ 987
K Q
Sbjct: 793 KENQ 796
Score = 37.0 bits (84), Expect = 5e-06
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 253 SYKID-------EIFTDMLNDFRIEKNYLKDIF-FSCIGFGNKEYGDKYFCTPIKKCEKY 304
SY ID + + NDFR++ L+ + ++ +G G+ E + FC K+ + +
Sbjct: 268 SYDIDCPLDYFLQTLEENANDFRVDSFPLRKLVGYTVLGLGDSESWPEKFCYQAKRADHW 327
Query: 305 IHLLGAQKLYKTLKLCDTQDNDETILLWKCNIFKT 339
I LG ++++ K+C I W + +T
Sbjct: 328 ISRLGGRRIFPLGKVCMKTGGSAKIDEWTSLLAET 362
Score = 20.0 bits (40), Expect = 0.68
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 5 EEEFLLKNILGTHYN 19
E E++L+N L HY+
Sbjct: 504 EPEYILENALKGHYS 518
Score = 18.1 bits (35), Expect = 2.6
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 958 WAIYGSQESGFSPCEKRVYTKGK 980
+ +Y S + S K VY K K
Sbjct: 206 YVLYSSLQGAASKAAKSVYDKLK 228
Score = 17.3 bits (33), Expect = 4.4
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 199 GCTIDNKNIG 208
GC KNIG
Sbjct: 115 GCCSSKKNIG 124
Score = 17.3 bits (33), Expect = 4.4
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 584 SSNQSYPDDEDEQIEVEDLIS 604
SS ++ D+E+ EVE ++
Sbjct: 118 SSKKNIGDNENTATEVEKAVN 138
Score = 16.5 bits (31), Expect = 7.6
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 199 GCTIDNKNIG 208
GC D KN G
Sbjct: 79 GCCSDKKNGG 88
Lambda K H
0.318 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1899
Number of extensions: 94
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 988
Length of database: 810
Length adjustment: 43
Effective length of query: 945
Effective length of database: 767
Effective search space: 724815
Effective search space used: 724815
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 30 (16.6 bits)
S2: 30 (16.2 bits)