>YLR383W SMC6 SGDID:S000004375, Chr XII from 885288-888632, Verified
           ORF, "Protein involved in structural maintenance of
           chromosomes; required for interchromosomal and sister
           chromatid recombination; homologous to S. pombe rad18"
          Length = 1114

 Score = 67.0 bits (162), Expect = 1e-14
 Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 225 TGKIIKLRIRNFLNHENLELTFNSYKNIIIGKNGRGKSAIAQAVAVGLGSQGKHAGRDIN 284
           +G I K+ +RNF+ HE+ EL   S  N I+G NG GKSAI  A+ +GLG++     R  +
Sbjct: 79  SGYIKKVILRNFMCHEHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSS 138

Query: 285 LAXXXXXXXXXXXXLVCSIEIFLSNSGNNAYNRDIYGDVIIIKRM 329
           L                 I + L NS   AY + I+G+ II++R+
Sbjct: 139 LKDLIREGCYS-----AKIILHLDNSKYGAYQQGIFGNEIIVERI 178

 Score = 51.6 bits (122), Expect = 6e-10
 Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 16/245 (6%)

Query: 1587 DEYKHYDENNKTEEKNHSIIPKNI---FEYDAVDMLNEKYEDI-LWKKRCNKKKEILEIL 1642
            D+ K Y EN K  E N + + + I    +        E+ E++ L   +   K+E+ ++ 
Sbjct: 849  DKKKVYLENIKKIEVNVAALKEGIQRQIQNACAFCSKERIENVDLPDTQEEIKRELDKVS 908

Query: 1643 KMHGYIEKENNTDNNLKDYYNNLIEQYINDEKSFNKQLKQISDLKNNYDMHLSNITLRKS 1702
            +M   I+K   +    ++    L E+  N  K   K+  +I +  N   +H +++  R  
Sbjct: 909  RM---IQKAEKSLGLSQEEVIALFEKCRNKYKEGQKKYMEIDEALNR--LH-NSLKARDQ 962

Query: 1703 KFVDILEKTKNQITLHFKNMLKRMNNYKGKIEFDDINRNLKV-LISINQDTSNNVFMEIN 1761
             + +  + T     + F+  LK +  + G + F    ++L++ +++ N + + NV    +
Sbjct: 963  NYKNAEKGTCFDADMDFRASLK-VRKFSGNLSFIKDTKSLEIYILTTNDEKARNV----D 1017

Query: 1762 SLSGGERSTIQMALLASFSLTESSSFHIFDELDVYMDELTRVKNMRLFCDFVEKNNDKQY 1821
            +LSGGE+S  QMALL +      S     DE DV+MD++ R     L    ++     Q 
Sbjct: 1018 TLSGGEKSFSQMALLLATWKPMRSRIIALDEFDVFMDQVNRKIGTTLIVKKLKDIARTQT 1077

Query: 1822 FFITP 1826
              ITP
Sbjct: 1078 IIITP 1082

 Score = 24.6 bits (52), Expect = 0.073
 Identities = 12/59 (20%), Positives = 26/59 (44%)

Query: 1648 IEKENNTDNNLKDYYNNLIEQYINDEKSFNKQLKQISDLKNNYDMHLSNITLRKSKFVD 1706
            IE+E     N++D Y   + +  +  K  + +LK   +     +  ++ + +   K VD
Sbjct: 705  IEQETKELQNIRDRYEEKLSEVRSRLKEIDGRLKSTKNEMRKTNFRMTELKMNVGKVVD 763

 Score = 22.7 bits (47), Expect = 0.28
 Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 1211 SQDELKYELKNLDELKANHDNIFSEQLDIEIKEKNNDINEIDEYIKDINDYINILEN 1267
            +Q+ +   L+NL  LKA +++  +++L  E+ +  +D+NE    ++  + +I++  N
Sbjct: 266  AQENMALHLENLKSLKAEYED--AKKLLRELNQ-TSDLNERKMLLQAKSLWIDVAHN 319

 Score = 22.7 bits (47), Expect = 0.28
 Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 570 GLNIVEDEIEKESELLKNCLNQIKQK--ELLLYPFEEELKISRERNKLIEKNFSKLYLYD 627
           G   ++D IE+E++ L+N  ++ ++K  E+     E + ++   +N++ + NF    L  
Sbjct: 697 GTQYLKDLIEQETKELQNIRDRYEEKLSEVRSRLKEIDGRLKSTKNEMRKTNFRMTEL-K 755

Query: 628 CNYKKVIFYELLKSCI 643
            N  KV+   +L S I
Sbjct: 756 MNVGKVVDTGILNSKI 771

 Score = 21.9 bits (45), Expect = 0.48
 Identities = 13/49 (26%), Positives = 22/49 (44%)

Query: 1240 EIKEKNNDINEIDEYIKDINDYINILENKKDMALNNNSLYKYFISTHKE 1288
            E+++   DIN     I+   D     E+KK + L N    +  ++  KE
Sbjct: 822  ELQQLKEDINSRQSKIQKYKDDTIYYEDKKKVYLENIKKIEVNVAALKE 870

 Score = 18.9 bits (37), Expect = 4.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 669 NTLINKNEDMKNELKEV 685
           N+L+   +D+KNE +++
Sbjct: 458 NSLVVSLQDVKNEERDI 474

 Score = 17.7 bits (34), Expect = 9.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 201 DIENDIGGTNLLLDDV 216
           ++EN+I G    +D+V
Sbjct: 325 NLENEISGIQQKVDEV 340

 Score = 17.7 bits (34), Expect = 9.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 19  ELHENINGSLNNKKRKKEHTAY 40
           +L E+IN   +  ++ K+ T Y
Sbjct: 825 QLKEDINSRQSKIQKYKDDTIY 846

Lambda     K      H
   0.315    0.134    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3668
Number of extensions: 214
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 9
Length of query: 1849
Length of database: 1114
Length adjustment: 50
Effective length of query: 1799
Effective length of database: 1064
Effective search space:  1914136
Effective search space used:  1914136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 34 (18.4 bits)
S2: 34 (17.7 bits)