Query= PFE1335c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(368 letters)
>YGR162W TIF4631 SGDID:S000003394, Chr VII from 824064-826922,
Verified ORF, "Translation initiation factor eIF4G,
subunit of the mRNA cap-binding protein complex (eIF4F)
that also contains eIF4E (Cdc33p); associates with the
poly(A)-binding protein Pab1p, also interacts with eIF4A
(Tif1p); homologous to Tif4632p"
Length = 952
Score = 37.4 bits (85), Expect = 2e-06
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 251 LIKNSYKYTENYINTSELQSRLSLTNINPSILSSKTLKNTQNLLKWKLKYANNTYKTNDH 310
L+ + + +N I T+++ SR+ ++ K L++ +N W +N KT
Sbjct: 815 LLDSLFGILDNIIQTAKISSRIKF-----KLIDIKELRHDKN---WNSDKKDNGPKTIQQ 866
Query: 311 KYDEAENSSSLLNTHNFTSRSNNNSTVNMEQANSQISSNKRSVLFEDPPRSRSS 364
++E E L N SR NN SSN+ S + PP S+ S
Sbjct: 867 IHEEEERQRQLKNNSRSNSRRTNN------------SSNRHSFRRDAPPASKDS 908
Score = 25.0 bits (53), Expect = 0.009
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 333 NNSTVNME-QANSQISSNKRSVLFEDPPRSRSS 364
N S NM+ +ANS+ SS +RS D RS S
Sbjct: 510 NTSVRNMDDRANSRTSSKRRSKRMNDDRRSNRS 542
Score = 17.3 bits (33), Expect = 1.9
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 93 EKAEGDENR 101
EK EG EN+
Sbjct: 315 EKTEGKENK 323
Score = 16.5 bits (31), Expect = 3.2
Identities = 8/17 (47%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
Query: 104 TEKNI--DGQEITIDKD 118
TEK + DG+ +DKD
Sbjct: 588 TEKKLAPDGKTELLDKD 604
Lambda K H
0.310 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 783
Number of extensions: 41
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 368
Length of database: 952
Length adjustment: 37
Effective length of query: 331
Effective length of database: 915
Effective search space: 302865
Effective search space used: 302865
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.0 bits)
S2: 27 (15.0 bits)