Query= PFE1345c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
minichromosome maintenance protein 3, putative
(962 letters)
>YEL032W MCM3 SGDID:S000000758, Chr V from 86937-89852, Verified
ORF, "Protein involved in DNA replication; component of
the Mcm2-7 hexameric complex that binds chromatin as a
part of the pre-replicative complex"
Length = 971
Score = 406 bits (1043), Expect = e-117
Identities = 274/693 (39%), Positives = 385/693 (55%), Gaps = 64/693 (9%)
Query: 122 NIIIHQRLICNINNFQTGNEQFELLAKCLIKEPYLALPAYQAAIKELWKSED-------S 174
NI+ H R+I ++++ + + F ++ EP +P + A+ +L S D S
Sbjct: 90 NILPH-RIIISLDDLREFDRSFW---SGILVEPAYFIPPAEKALTDLADSMDDVPHPNAS 145
Query: 175 KVDIDPP-KIGICGWLGRHHVTPRGLQSSMINKLVAVEGVVNKCSTVQPKLVQSVYIGEA 233
V P K+ G G H ++PR L + +NKLV+VEG+V K S V+PKL++SV+
Sbjct: 146 AVSSRHPWKLSFKGSFGAHALSPRTLTAQHLNKLVSVEGIVTKTSLVRPKLIRSVHYA-- 203
Query: 234 VHDMNADAKTSEKTVHLRPHYDITDFDKTAKDSGRP-PASDPEGRIMHKHEIGLCKYKNH 292
AKT H R + D T T + P D EG + E G + +H
Sbjct: 204 -------AKTGR--FHYRDYTDATTTLTTRIPTPAIYPTEDTEGNKLTT-EYGYSTFIDH 253
Query: 293 QKFVIQETPEDAPTGQMPRWVEVIVEDDLCDIVKCGDRVRVWGVYRA-NCGQANSTNSG- 350
Q+ +QE PE AP GQ+PR ++VI++DDL D K GDRV V GV+++ G N +NS
Sbjct: 254 QRITVQEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVGVFKSLGAGGMNQSNSNT 313
Query: 351 -LGRSFLIANNV---LVKNKETYDSNLCISEADKKNFHAFAKKDNTIDILGYSFAPSICG 406
+G LI N L + +++ D +N + +KK + DIL S APSI G
Sbjct: 314 LIGFKTLILGNTVYPLHARSTGVAARQMLTDFDIRNINKLSKKKDIFDILSQSLAPSIYG 373
Query: 407 QDIVKKAIVLMLAGGTERALPS-HHIRGDIHIMLVGDPSCGKSQLLRYVMSIMPGTVSAT 465
D +KKAI+LML GG E+ L + H+RGDI+I++VGDPS KSQLLR+V++ ++ T
Sbjct: 374 HDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATT 433
Query: 466 GRGSSGVGLTAAIVTDQDTGERVVEGGAMVMGDRRVVCIDEFDKMQPTDRVAIHEVMEQQ 525
GRGSSGVGLTAA+ TD++TGER +E GAMV+ DR VVCIDEFDKM DRVAIHEVMEQQ
Sbjct: 434 GRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQ 493
Query: 526 TVTVAKAGIHTTLNARCTVLAAANPLYGCWNDALDMGQQLQFEPSLLSRFDLIFLVRDSA 585
TVT+AKAGIHTTLNARC+V+AAANP++G ++ D Q + SLLSRFDL+F+V D
Sbjct: 494 TVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDI 553
Query: 586 TEQDDERIAESVLRNVTEKAKP---IMNESRNNQKNFVIQ-ADSYDINPKAQHIS---IY 638
E D I+E VLR T + P + E + N + + DINP+ S +
Sbjct: 554 NEIRDRSISEHVLR--THRYLPPGYLEGEPVRERLNLSLAVGEDADINPEEHSNSGAGVE 611
Query: 639 XXXXXXXXXXXXXXXXXXXYETPIFANRDEMIYYDKNGVE-HEILTVPFFKKYLHYVKNI 697
+ N+ + NG E +++T+PF +KY+ Y K
Sbjct: 612 NEGEDDEDHVFEKFNPLLQAGAKLAKNKG-----NYNGTEIPKLVTIPFLRKYVQYAKE- 665
Query: 698 FYHEKQRTDGWKPYPEVSDEACEVITELYADLRERASKYSHNKLIQGVTPRTLEAIIRIA 757
+ P+++ EA VI + Y DLR N +T RTLE +IR+A
Sbjct: 666 -----------RVIPQLTQEAINVIVKNYTDLRN-----DDNTKKSPITARTLETLIRLA 709
Query: 758 SSHAKLKLNRYVTSVDVNYAKKLLMYTLFGEEI 790
++HAK++L++ V VD A LL + L GE+I
Sbjct: 710 TAHAKVRLSKTVNKVDAKVAANLLRFALLGEDI 742
Score = 18.1 bits (35), Expect = 3.0
Identities = 12/44 (27%), Positives = 16/44 (36%)
Query: 100 KITELRTEAIDEYNRMQNKNIPNIIIHQRLICNINNFQTGNEQF 143
K+T++ AI E Q I IH L + N F
Sbjct: 477 KMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVF 520
Lambda K H
0.317 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1824
Number of extensions: 82
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 962
Length of database: 971
Length adjustment: 44
Effective length of query: 918
Effective length of database: 927
Effective search space: 850986
Effective search space used: 850986
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 31 (17.1 bits)
S2: 31 (16.5 bits)