Query= PFE1360c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) methionine
aminopeptidase, putative
(235 letters)
>YLR244C MAP1 SGDID:S000004234, Chr XII from 626333-625170, reverse
complement, Verified ORF, "Methionine aminopeptidase,
catalyzes the cotranslational removal of N-terminal
methionine from nascent polypeptides; function is
partially redundant with that of Map2p"
Length = 387
Score = 197 bits (501), Expect = 2e-55
Identities = 96/236 (40%), Positives = 143/236 (60%), Gaps = 2/236 (0%)
Query: 1 MKKACKLASECLKLCLENSKEGITTDIIDNMAYDFYIKNNAYPAGLNFHSFPKSICASPN 60
++KAC L E L + + + GITTD +D + ++ IK AYP+ LN+++FPKS+C S N
Sbjct: 138 IRKACMLGREVLDIAAAHVRPGITTDELDEIVHNETIKRGAYPSPLNYYNFPKSLCTSVN 197
Query: 61 EVVCHGIPNLRKLQRGDIITYDCTVFLDGVFGDCAGTVGIGE-ISERHKKLMDVSKECLY 119
EV+CHG+P+ L+ GDI+ D +++ G D T +GE IS+ + S+ECL
Sbjct: 198 EVICHGVPDKTVLKEGDIVNLDVSLYYQGYHADLNETYYVGENISKEALNTTETSRECLK 257
Query: 120 KAISICRDGQLFSEIGRIITEHANKNGFNVIKDFCGHFIGTHMHMYPLIEHHYPNSHNNH 179
AI +C+ G F E+G I +HA +N +V++ +CGH +G H P I HY +
Sbjct: 258 LAIKMCKPGTTFQELGDHIEKHATENKCSVVRTYCGHGVGEFFHCSPNIP-HYAKNRTPG 316
Query: 180 RMKKGQIFTIEPILSEGSINIYTWKDKWTVCTNDNSFCSQWEHTILVLDNYAEILT 235
MK G +FTIEP+++EG+ TW D WT T D +Q+EHT+LV ++ EILT
Sbjct: 317 VMKPGMVFTIEPMINEGTWKDMTWPDDWTSTTQDGKLSAQFEHTLLVTEHGVEILT 372
Score = 13.5 bits (23), Expect = 6.6
Identities = 4/10 (40%), Positives = 7/10 (70%)
Query: 119 YKAISICRDG 128
+KA+ +DG
Sbjct: 62 HKALHNAKDG 71
Lambda K H
0.323 0.139 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 319
Number of extensions: 10
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 235
Length of database: 387
Length adjustment: 27
Effective length of query: 208
Effective length of database: 360
Effective search space: 74880
Effective search space used: 74880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.1 bits)
S2: 22 (13.1 bits)