>YDR375C BCS1 SGDID:S000002783, Chr IV from 1226527-1225157, reverse
           complement, Verified ORF, "Protein of the mitochondrial
           inner membrane that functions as an ATP-dependent
           chaperone, required for the assembly of the cytochrome
           bc(1) complex from the Rip1p and Qcr10p proteins; member
           of the CDC48/PAS1/SEC18 ATPase family"
          Length = 456

 Score =  291 bits (745), Expect = 3e-83
 Identities = 161/418 (38%), Positives = 235/418 (56%), Gaps = 26/418 (6%)

Query: 41  NEYFNAGVGIISVGALVTVVNRLNSCVYQTIKKNIFTSLEITINDNAYYWILEYIVKKGV 100
           N YF AG G++ +G  + V         + + + +   LEI   D +Y W L ++ K   
Sbjct: 49  NPYFAAGGGLMILGTGLAVARSGIIKASRVLYRQMIVDLEIQSKDKSYAWFLTWMAKHPQ 108

Query: 101 -ISRHLSLKTQMTNEKNKK-NVLFSFLPSVGNHLLFYDNHFIFVERSRDKNMISEVNRSM 158
            +SRHLS++T      N   +  FS +P  GNH + Y   FI ++R R   MI   N S 
Sbjct: 109 RVSRHLSVRTNYIQHDNGSVSTKFSLVPGPGNHWIRYKGAFILIKRERSAKMIDIANGS- 167

Query: 159 PFENIKLSTFIWSKYVFEKILNDAKVYIEKKEEGKTLVYKSFGPEWRPFGNPKNKRPINS 218
           PFE + L+T    K++F+ ILN+AK    K  EGKT++Y SFGPEWR FG PK KR + S
Sbjct: 168 PFETVTLTTLYRDKHLFDDILNEAKDIALKTTEGKTVIYTSFGPEWRKFGQPKAKRMLPS 227

Query: 219 VILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFN 278
           VIL   + E I++D+  F+ + KWY D+GIPYRR YLL+GPPG GK+S I ALAG  D+N
Sbjct: 228 VILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYN 287

Query: 279 ICTININDIYLTDDRFIHLLATIPPKTXXXXXXXXXXXXNDPIMKYXXXXXXXXXXXXXX 338
           IC +N+++  LTDDR  HL+  +P ++                +                
Sbjct: 288 ICILNLSENNLTDDRLNHLMNNMPERS----------------ILLLEDIDAAFNKRSQT 331

Query: 339 XXXXXHSTIKTLGVSYSGLLNALDGIVATEERIIFMTTNNIEKLPPTLIRPGRVDMKILI 398
                HS+     V++SGLLNALDG+ ++EE I FMTTN+ EKL   ++RPGR+D K+ +
Sbjct: 332 GEQGFHSS-----VTFSGLLNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRIDYKVFV 386

Query: 399 PYANIYQYKKMFLRFFPEHHELSNKFAKIFQ--DFNLSMAEIQSFFLFSKVDPYKTVQ 454
             A  YQ +KMF++F+P   ++  KF    +  D  +S A++Q  F+ +K  P+  ++
Sbjct: 387 GNATPYQVEKMFMKFYPGETDICKKFVNSVKELDITVSTAQLQGLFVMNKDAPHDALK 444

Lambda     K      H
   0.321    0.138    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 509
Number of extensions: 21
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 471
Length of database: 456
Length adjustment: 33
Effective length of query: 438
Effective length of database: 423
Effective search space:   185274
Effective search space used:   185274
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.4 bits)
S2: 25 (14.2 bits)