Query= PFF0160c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
dihydroorotate dehydrogenase, mitochondrial precursor
(569 letters)
>YKL216W URA1 SGDID:S000001699, Chr XI from 25216-26160, Verified
ORF, "Dihydroorotate dehydrogenase, catalyzes the fourth
enzymatic step in the de novo biosynthesis of
pyrimidines, converting dihydroorotic acid into orotic
acid"
Length = 314
Score = 54.3 bits (129), Expect = 7e-12
Identities = 30/98 (30%), Positives = 54/98 (55%)
Query: 470 ENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYS 529
+N GG+ G +K + + Y +I +I +GGI SG DA E + GAS+ Q+ +
Sbjct: 216 KNGFGGIGGEYVKPTALANVRAFYTRLRPEIKVIGTGGIKSGKDAFEHLLCGASMLQIGT 275
Query: 530 CLVFNGMKSAVQIKRELNHLLYQRGYYNLKEAIGRKHS 567
L G+K +I++EL ++ +GY ++ + G+ +S
Sbjct: 276 ELQKEGVKIFERIEKELKDIMEAKGYTSIDQFRGKLNS 313
Score = 31.2 bits (69), Expect = 6e-05
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 10/94 (10%)
Query: 257 GNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNK 316
GN +PR + V SI NS G N G D ++ +K + + + G+SI +N
Sbjct: 55 GNPEPR-YISVPLGSI-NSMGLPNEGIDYYLSYVLNRQKNYPDAPAIFFSVAGMSIDENL 112
Query: 317 DTVNIVDDLKYCINKIGRYADYIAINVSSPNTPG 350
+ + + D + +N+S PN PG
Sbjct: 113 NLLRKIQD--------SEFNGITELNLSCPNVPG 138
Score = 18.1 bits (35), Expect = 0.54
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 20/68 (29%)
Query: 484 ISTKFICEMYNYTNKQIPIIASGGIF----SGLDALEKIEAGASVCQLYSCLVFNGMKSA 539
++TKF+ Y + P + + G+ LD L +AGA + KSA
Sbjct: 5 LTTKFLNNTY-----ENPFMNASGVHCMTTQELDELANSKAGAFIT-----------KSA 48
Query: 540 VQIKRELN 547
++RE N
Sbjct: 49 TTLEREGN 56
Score = 16.5 bits (31), Expect = 1.6
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 223 VAAGFDKNGVCIDSILKLGFSFIEIGT 249
+ G K+G L G S ++IGT
Sbjct: 249 IGTGGIKSGKDAFEHLLCGASMLQIGT 275
Score = 15.8 bits (29), Expect = 2.7
Identities = 7/17 (41%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Query: 99 YVSVPFKINIRNLGTSN 115
Y+SVP +I ++G N
Sbjct: 61 YISVPLG-SINSMGLPN 76
Lambda K H
0.319 0.138 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 465
Number of extensions: 29
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 569
Length of database: 314
Length adjustment: 32
Effective length of query: 537
Effective length of database: 282
Effective search space: 151434
Effective search space used: 151434
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.4 bits)
S2: 25 (14.2 bits)