Query= PFF0345w Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) translation initiation factor IF-2, putative (977 letters)
>YAL035W FUN12 SGDID:S000000033, Chr I from 76428-79436, Verified ORF,
            "GTPase, required for general translation initiation by
            promoting Met-tRNAiMet binding to ribosomes and ribosomal
            subunit joining; homolog of bacterial IF2"
          Length = 1002

 Score =  578 bits (1490), Expect = e-169
 Identities = 313/604 (51%), Positives = 406/604 (67%), Gaps = 21/604 (3%)

Query: 390  EYRSAIVCILGHVDTGKTKLLDKLRHTNVQDNEAGGITQQIGATFFPKDVLXXXXXXXXX 449
            + RS I CILGHVDTGKTKLLDK+R TNVQ  EAGGITQQIGAT+FP D +         
Sbjct: 402  DLRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAE 461

Query: 450  XXXCLSK--GIMIIDTPGHESFYNLRKRGSSLCDIAILVIDLMHGLEQQTKESIQILKQR 507
                     G+++IDTPGHESF NLR RGSSLC+IAILVID+MHGLEQQT ESI++L+ R
Sbjct: 462  YEKQTFDVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDR 521

Query: 508  NCPFVIALNKIDRLYMWNKNDWSPFNNTFKKQKPDTQEEFHDRLKNIINELSEQGLNCQL 567
              PFV+ALNKIDRLY W     + F ++F KQ    QEEF  R   I  EL+EQGLN +L
Sbjct: 522  KAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSEL 581

Query: 568  YWENMNPRKYVSIVPTSAITGEGIADLIMVLVKLTQTFMLKNIQYHDKLECTVLEVKNIE 627
            Y++N N  KYVSIVPTSA+TGEG+ DL+ +L++LTQ  M K + Y   +E T+LEVK +E
Sbjct: 582  YFQNKNMSKYVSIVPTSAVTGEGVPDLLWLLLELTQKRMSKQLMYLSHVEATILEVKVVE 641

Query: 628  GLGTTIDVILTNGILRESDTIVLCGINGPIVTVIRALLTPQPLKELRIKNEYIHHKYIKA 687
            G GTTIDVIL+NG LRE D IVLCG+NGPIVT IRALLTPQPL+ELR+K+EY+HHK +KA
Sbjct: 642  GFGTTIDVILSNGYLREGDRIVLCGMNGPIVTNIRALLTPQPLRELRLKSEYVHHKEVKA 701

Query: 688  CIGVKISANNLEEVLCGTSLFVVNNIXXXXXYKKKVMTDVSDVFNHVDKTGVGLYVMAST 747
             +GVKI+AN+LE+ + G+ L VV            VM D++ + + VD TG G+ V AST
Sbjct: 702  ALGVKIAANDLEKAVSGSRLLVVGPEDDEDELMDDVMDDLTGLLDSVDTTGKGVVVQAST 761

Query: 748  LGSLEALLIFLNDSKIPVFGVNIGTIQKKDVKKASIMREKGRPEYAVILAFDVKIDPEAE 807
            LGSLEALL FL D KIPV  + +G + K+DV KAS M EK  PEYAV+L FDVK+D EAE
Sbjct: 762  LGSLEALLDFLKDMKIPVMSIGLGPVYKRDVMKASTMLEKA-PEYAVMLCFDVKVDKEAE 820

Query: 808  KEAALLGVEIMQRDIIYHLFDSFTAYLXXXXXXXXQSKITDAIFPCELSVINDCVFNKKD 867
            + A   G++I   D+IYHLFDSFTAY         +  +  AIFPC L  +   + NK+ 
Sbjct: 821  QYAEQEGIKIFNADVIYHLFDSFTAYQEKLLEERRKDFLDYAIFPCVLQTLQ--IINKRG 878

Query: 868  PIVIGVRVECGQLKIGTPLFV--------PEKNIKIGNVVSVQSNKKNFDKARKGDE--- 916
            P++IGV V  G L++GTP+            + + +G V+S++ N +   + +KG     
Sbjct: 879  PMIIGVDVLEGTLRVGTPICAVKTDPTTKERQTLILGKVISLEINHQPVQEVKKGQTAAG 938

Query: 917  VCIKI---CGEPHVTYGKHFDSTQKIYSKITRESIDVLKE-YFRSELTMEDWKLVVQLKK 972
            V +++    G+  + +G+H D    +YS ++R SID LK+  FR ++   DW L+ +LK 
Sbjct: 939  VAVRLEDPSGQQPI-WGRHVDENDTLYSLVSRRSIDTLKDKAFRDQVARSDWLLLKKLKV 997

Query: 973  IFNI 976
            +F I
Sbjct: 998  VFGI 1001

 Score = 20.0 bits (40), Expect = 0.84
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 493 LEQQTKESIQILKQRNCPFVIALN-KIDRLYMWNKNDWSPFNNTF-KKQKPDTQEEFHDR 550
           L ++ KE  ++L++R    + + N K+  L   +  +  P    + KK+K  TQE   + 
Sbjct: 237 LTRKQKEEKKLLERRRAALLSSGNVKVAGLAKKDGEENKPKKVVYSKKKKRTTQENASEA 296

Query: 551 LKNIINELSE 560
           +K+   + SE
Sbjct: 297 IKSDSKKDSE 306

 Score = 17.3 bits (33), Expect = 5.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 23 EEKREDDVKANENEENEPT 41
          +E+ E+D   NE     PT
Sbjct: 14 DEEFEEDAAQNEEISATPT 32
Lambda     K      H
   0.318    0.137    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1785
Number of extensions: 69
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 977
Length of database: 1002
Length adjustment: 44
Effective length of query: 933
Effective length of database: 958
Effective search space:   893814
Effective search space used:   893814
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 31 (17.1 bits)
S2: 31 (16.5 bits)