Query= PFF0395c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein, conserved
(345 letters)
>YBR246W YBR246W SGDID:S000000450, Chr II from 711586-712749,
Uncharacterized ORF, "Hypothetical protein"
Length = 387
Score = 67.8 bits (164), Expect = 4e-16
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 31/207 (14%)
Query: 164 LVHGQQEKTWKAHEYHVWSCTFNGNE---NVITTGSDDCSFVIWDLRTTTISQQNKKSHT 220
++H + + K HE W+ F + +V+ TG DD + DLR+ N + H
Sbjct: 184 VIHVESGQFLKPHELECWTAEFGSLQPFQDVVFTGGDDSRIMAHDLRSKEFIWSNNRIHD 243
Query: 221 QGITAVKF------ENFSELLYTASYDNNIRIFDLRNIREPI-----------QTVDVNS 263
G+ ++K N + T SYD+NIR DLR + E I D+
Sbjct: 244 AGVVSIKCSQPNFRNNKPTSIITGSYDDNIRSLDLRMMGESIFPGANVPTVNKLACDLGG 303
Query: 264 NIWRI------KFLYKNNSVDNLLVAACDGGAKIFKKSNNDFIYDKGIFNNNELTYGIDV 317
+WR + +N D LLV GAK+ ++N D+ + L G D
Sbjct: 304 GVWRFVESPIDQEQSHHNGSDRLLVCCMYNGAKVVTMNDNS---DEYFQIQHYLKKGHD- 359
Query: 318 IDMLRPKNEKKKIYLSCSFYNKEVQLW 344
M + + +CSFY+ +Q W
Sbjct: 360 -SMCYGGDWSNSLIATCSFYDNSLQTW 385
Score = 18.1 bits (35), Expect = 0.40
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 262 NSNIWRIKFLYKNNSVDNLLVAACDGGAKIFKK 294
N +WRI+ K++ N L ++F+K
Sbjct: 88 NIMLWRIRCTDKDDFQSNELDIHAIANLQLFEK 120
Lambda K H
0.319 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 443
Number of extensions: 28
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 345
Length of database: 387
Length adjustment: 30
Effective length of query: 315
Effective length of database: 357
Effective search space: 112455
Effective search space used: 112455
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.5 bits)
S2: 23 (13.5 bits)