Query= PFF0420c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) proteasome
subunit alpha type 2, putative
(235 letters)
>YML092C PRE8 SGDID:S000004557, Chr XIII from 86739-85987, reverse
complement, Verified ORF, "20S proteasome beta-type
subunit"
Length = 250
Score = 214 bits (546), Expect = 1e-60
Identities = 121/243 (49%), Positives = 154/243 (63%), Gaps = 17/243 (6%)
Query: 6 YSFSLTTFSPTGKLVQIEYALNRVSSSSPALGIRAKNGVIIATEKKSPNELIEENSIFKI 65
YSFSLTTFSP+GKL QI+YAL V +LGI+A NGV+IATEKKS + L ++ K+
Sbjct: 5 YSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKV 64
Query: 66 QQISEHIGIVYAGMPGDFRVLLKRARKEA-IRYSLQYGSEILVKELVKIIASIVQEFTQT 124
++ IG VY+GM D+RVL+ ++RK A Y YG K LV +A I+QE TQ+
Sbjct: 65 SLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQS 124
Query: 125 GGVRPFGLSLLICGVDVY-GYHLYQIDPSGCYFNWMATCVGKDYQNNMSFLEKRYNKDIE 183
GGVRPFG+SLLI G D + G+ LYQ+DPSG YF W AT +GK +FLEKR+N ++E
Sbjct: 125 GGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELE 184
Query: 184 IEDAIHTAILTLKESYEGVLNEKNIEIGVAYDNKP---------------FKILTQNEIK 228
+EDAIH A+LTLKES EG N IE+ + D P F+ LT EI
Sbjct: 185 LEDAIHIALLTLKESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTSQEIN 244
Query: 229 DYL 231
D L
Sbjct: 245 DRL 247
Lambda K H
0.318 0.137 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 191
Number of extensions: 8
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 250
Length adjustment: 23
Effective length of query: 212
Effective length of database: 227
Effective search space: 48124
Effective search space used: 48124
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.0 bits)
S2: 20 (12.3 bits)