Query= PFF0420c Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) proteasome subunit alpha type 2, putative (235 letters)
>YML092C PRE8 SGDID:S000004557, Chr XIII from 86739-85987, reverse
           complement, Verified ORF, "20S proteasome beta-type
           subunit"
          Length = 250

 Score =  214 bits (546), Expect = 1e-60
 Identities = 121/243 (49%), Positives = 154/243 (63%), Gaps = 17/243 (6%)

Query: 6   YSFSLTTFSPTGKLVQIEYALNRVSSSSPALGIRAKNGVIIATEKKSPNELIEENSIFKI 65
           YSFSLTTFSP+GKL QI+YAL  V     +LGI+A NGV+IATEKKS + L    ++ K+
Sbjct: 5   YSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKV 64

Query: 66  QQISEHIGIVYAGMPGDFRVLLKRARKEA-IRYSLQYGSEILVKELVKIIASIVQEFTQT 124
             ++  IG VY+GM  D+RVL+ ++RK A   Y   YG     K LV  +A I+QE TQ+
Sbjct: 65  SLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQS 124

Query: 125 GGVRPFGLSLLICGVDVY-GYHLYQIDPSGCYFNWMATCVGKDYQNNMSFLEKRYNKDIE 183
           GGVRPFG+SLLI G D + G+ LYQ+DPSG YF W AT +GK      +FLEKR+N ++E
Sbjct: 125 GGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELE 184

Query: 184 IEDAIHTAILTLKESYEGVLNEKNIEIGVAYDNKP---------------FKILTQNEIK 228
           +EDAIH A+LTLKES EG  N   IE+ +  D  P               F+ LT  EI 
Sbjct: 185 LEDAIHIALLTLKESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTSQEIN 244

Query: 229 DYL 231
           D L
Sbjct: 245 DRL 247
Lambda     K      H
   0.318    0.137    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 191
Number of extensions: 8
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 250
Length adjustment: 23
Effective length of query: 212
Effective length of database: 227
Effective search space:    48124
Effective search space used:    48124
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.0 bits)
S2: 20 (12.3 bits)