Query= PFF0520w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
calcium-dependent protein kinase
(509 letters)
>YDL101C DUN1 SGDID:S000002259, Chr IV from 281848-280307, reverse
complement, Verified ORF, "Cell-cycle checkpoint
serine-threonine kinase required for DNA damage-induced
transcription of certain target genes, phosphorylation
of Rad55p and Sml1p, and transient G2/M arrest after DNA
damage; also regulates postreplicative DNA repair"
Length = 513
Score = 199 bits (506), Expect = 2e-55
Identities = 117/339 (34%), Positives = 177/339 (52%), Gaps = 35/339 (10%)
Query: 25 KNTNENTSKQSNDYKYDIN-------TSCISREGTTTLERKNLILCHSGKLEDKYIIDEK 77
+N +E S +S YK D ++ S+ TT+ + L DKY++ ++
Sbjct: 146 ENDDEKVSSESRSYKNDDEVFKKPQISATSSQNATTSAAIRKLNKTRPVSFFDKYLLGKE 205
Query: 78 LGQGTYGCVYKGIDKVTNQLYAIK----EEKKDRLKNINRFFQEIEIMKKLDHPNIVKLY 133
LG G Y V + +K T Q A+K ++ D+ KN +F +E I+ ++ HPNIV L
Sbjct: 206 LGAGHYALVKEAKNKKTGQQVAVKIFHAQQNDDQKKN-KQFREETNILMRVQHPNIVNLL 264
Query: 134 ETY-----ENDNYIYLIMELCSGRELFDSIIENGSFTEKNAATIMKQIFSAIFYLHSLNI 188
+++ ++ YL++E ELF+ I+ + + + KQ+ + + YLH NI
Sbjct: 265 DSFVEPISKSQIQKYLVLEKIDDGELFERIVRKTCLRQDESKALFKQLLTGLKYLHEQNI 324
Query: 189 VHRDLKPENFL----------------FQSENKDSLLKIIDFGLSKNLGTGEFTTTKAGT 232
+HRD+KPEN L + + D +KI DFGL+K G +FT T GT
Sbjct: 325 IHRDIKPENILLNITRRENPSQVQLGPWDEDEIDIQVKIADFGLAKFTGEMQFTNTLCGT 384
Query: 233 PYYVAPQVLDGK-YDKKCDIWSSGVIMYTLLCGYPPFYGDTDNEVLK-KVKKGEFCFYEN 290
P YVAP+VL K Y K D+WS+GVI+Y LCG+PPF LK ++ + ++ FY
Sbjct: 385 PSYVAPEVLTKKGYTSKVDLWSAGVILYVCLCGFPPFSDQLGPPSLKEQILQAKYAFYSP 444
Query: 291 DWGSISSDAKNLITKLLTYNPNERCTIEEALNHPWITQM 329
W I +LI+ LL NP+ER I+EALNHPW +
Sbjct: 445 YWDKIDDSVLHLISNLLVLNPDERYNIDEALNHPWFNDI 483
Score = 20.0 bits (40), Expect = 0.21
Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 366 HLCDVEINNL-RNIFIALDVDNSGT 389
HL ++++N RN+ +D +GT
Sbjct: 81 HLLQMDVDNFQRNLINVIDKSRNGT 105
Score = 17.3 bits (33), Expect = 1.4
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 474 DDIENPLIDKAIDSLLQEVDLNGDGEVNKNYNHEKG 509
D+ + LI+ ID +NG+ V K+Y + G
Sbjct: 88 DNFQRNLIN-VIDKSRNGTFINGNRLVKKDYILKNG 122
Score = 15.0 bits (27), Expect = 6.9
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 95 NQLYAIKEEKKDRLKNINRFFQEIEIMKKLD 125
N + I + + N NR ++ I+K D
Sbjct: 93 NLINVIDKSRNGTFINGNRLVKKDYILKNGD 123
Score = 15.0 bits (27), Expect = 6.9
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 495 NGDGEVNKNYNHE 507
N D + NK + E
Sbjct: 236 NDDQKKNKQFREE 248
Lambda K H
0.317 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 653
Number of extensions: 50
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 509
Length of database: 513
Length adjustment: 35
Effective length of query: 474
Effective length of database: 478
Effective search space: 226572
Effective search space used: 226572
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)