>YPL093W NOG1 SGDID:S000006014, Chr XVI from 370975-372918, Verified
           ORF, "Putative GTPase that associates with free 60S
           ribosomal subunits in the nucleolus and is required for
           60S ribosomal subunit biogenesis; constituent of 66S
           pre-ribosomal particles; member of the ODN family of
           nucleolar G-proteins"
          Length = 647

 Score =  383 bits (984), Expect = e-110
 Identities = 206/504 (40%), Positives = 311/504 (61%), Gaps = 68/504 (13%)

Query: 9   FKDIKPVVSAKELVDVVLSKTQRKTPTEIHKGFKITRIRNFYMRKVKICQELFREKLQNI 68
           +KDI  V  A +L+D+VL++TQRKTPT I  GFKITRIR FYMRKVK   E F EK ++I
Sbjct: 5   WKDIPTVAPANDLLDIVLNRTQRKTPTVIRPGFKITRIRAFYMRKVKYTGEGFVEKFEDI 64

Query: 69  INDFPKLDDIHPFYSDLANILYDRDHYKLSLGQCSYVSKSLIRICHDYIKLLKFSSSLYK 128
           +  FP ++D+HPF+ DL + LY+++HYK+SL   S     + ++  DY++LLKF  SL++
Sbjct: 65  LKGFPNINDVHPFHRDLMDTLYEKNHYKISLAAISRAKSLVEQVARDYVRLLKFGQSLFQ 124

Query: 129 CKMLKISALGRMCKLVKKLQPSLLYLEEVRQNLSRLPSINPHKKTIILSGAPNVGKSSFM 188
           CK LK +ALGRM  +VKKL+  L YLE+VRQ++ RLPSI+P+ +T+++ G PNVGKSSF+
Sbjct: 125 CKQLKRAALGRMATIVKKLRDPLAYLEQVRQHIGRLPSIDPNTRTLLICGYPNVGKSSFL 184

Query: 189 NIVSRANVDVQSYSFTTKNLYVGHFDHKLNKYQIIDTPGLLDRAFENRNTIEMTTITALA 248
             +++++VDVQ Y+FTTK+LYVGHFD+K  ++Q IDTPG+LDR  E  N IEM +I A+A
Sbjct: 185 RCITKSDVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSIYAIA 244

Query: 249 HINGVILFIIDISEQCGLTIKEQINLFYSIKSVFSNKSIVIGFNKIDKCNMDSLSIDNKL 308
           H+   +L+ +D+SEQCG TI+ Q+ LF+SIK +F+NKS+++  NK D    + L  +   
Sbjct: 245 HLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMVVINKTDIIRPEDLDEER-- 302

Query: 309 LIKQILDNVKN--PIKFSSFSTLTGVGVEQAKITACELLKNDQAESILLDQEQL------ 360
              Q+L++VK    ++  + S      V + +  ACE L   + E+ L  Q ++      
Sbjct: 303 --AQLLESVKEVPGVEIMTSSCQLEENVMEVRNKACEKLLASRIENKLKSQSRINNVLNK 360

Query: 361 LNTKLGETKNHLNRTPFIPESVIRERKLRQEKAQSTNNMFDSTNADSITSPCDPTNATEG 420
           ++    + ++ + RTPFIPESV   +K   E                             
Sbjct: 361 IHVAQPQARDDVKRTPFIPESVKNLKKYDPE----------------------------- 391

Query: 421 DPNKQYTMRELKLKKKNKSRQSYLSNRTDDKVLQIDLQNENGGAGVYSVDIRNNYDIK-E 479
           DPN++   R                          D++ ENGGAGV++V++++ Y ++ +
Sbjct: 392 DPNRRKLAR--------------------------DIEAENGGAGVFNVNLKDKYLLEDD 425

Query: 480 EYKYDVIPEIYNGKNISDFIDMDI 503
           E+K D++PEI +GKN+ DF+D +I
Sbjct: 426 EWKNDIMPEILDGKNVYDFLDPEI 449

 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 639 RKKAYKLNKMAYKKITKGTK-GEADRSIPSLKPRHLFSGKRSIGKTSRR 686
           R KA ++ KM  ++  +  K GE+DR       +HLFSGKR +GKT  R
Sbjct: 599 RSKADRMAKMERRERNRHAKQGESDRHNAVSLSKHLFSGKRGVGKTDFR 647

 Score = 16.2 bits (30), Expect = 5.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 64  KLQNIINDFPKLDDIHPFYSDLANILYD 91
           KLQ +  +  KL++   + SD    +YD
Sbjct: 452 KLQALEEEEEKLENEGFYNSDDEEEIYD 479

Lambda     K      H
   0.317    0.134    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1029
Number of extensions: 38
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 686
Length of database: 647
Length adjustment: 38
Effective length of query: 648
Effective length of database: 609
Effective search space:   394632
Effective search space used:   394632
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.7 bits)
S2: 28 (15.4 bits)