Query= PFF0700c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
protein L19, putative
(196 letters)
>YBR084C-A RPL19A SGDID:S000002156, Chr II from
415255-415254,414747-414180, reverse complement,
Verified ORF, "Protein component of the large (60S)
ribosomal subunit, nearly identical to Rpl19Bp and has
similarity to rat L19 ribosomal protein; rpl19a and
rpl19b single null mutations result in slow growth,
while the double null mutation is lethal"
Length = 189
Score = 154 bits (390), Expect = 7e-43
Identities = 79/173 (45%), Positives = 109/173 (63%)
Query: 14 ICSLTLQKRLAASVLKCGKNKIWMDPNEISEISLANSRFSIRKLYKEGLILKKPQKVHSR 73
+ +L QKRLAASV+ GK K+W+DPNE SEI+ ANSR +IRKL K G I+KK VHS+
Sbjct: 1 MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSK 60
Query: 74 ARVRLYKLAKRKGRHMGIGKRKGTKNARTNQKTLWIXXXXXXXXXXXXXXXXXXXXXHLY 133
+R R + +KR+GRH G GKRKGT+ AR + +WI HLY
Sbjct: 61 SRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLY 120
Query: 134 HSFYLKCKGNQFKNKRTLIEAIQREKNETLKKKAIADQLEAKRLKAQVLRNKR 186
H Y + KGN FK+KR L+E I + K + ++KA+ ++ EA+RLK + R++R
Sbjct: 121 HVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRR 173
Score = 13.9 bits (24), Expect = 2.0
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 13 FICSLTLQKRLAASVLKCGK 32
+I L + +RL A GK
Sbjct: 95 WIRRLRVLRRLLAKYRDAGK 114
Score = 11.5 bits (18), Expect = 10.0
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 49 NSRFSIRKLYKEGLILKKPQKV 70
N R+L ++ Q+V
Sbjct: 156 NEEAEARRLKNRAARDRRAQRV 177
Lambda K H
0.322 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 146
Number of extensions: 8
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 196
Length of database: 189
Length adjustment: 20
Effective length of query: 176
Effective length of database: 169
Effective search space: 29744
Effective search space used: 29744
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.2 bits)
S2: 18 (11.5 bits)