Query= PFF1275c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
3-oxoacyl-(acyl-carrier-protein) synthase i/ii
(474 letters)
>YER061C CEM1 SGDID:S000000863, Chr V from 279624-278296, reverse
complement, Verified ORF, "Mitochondrial beta-keto-acyl
synthase with possible role in fatty acid synthesis;
required for mitochondrial respiration"
Length = 442
Score = 217 bits (553), Expect = 6e-61
Identities = 121/300 (40%), Positives = 179/300 (59%), Gaps = 15/300 (5%)
Query: 180 YEKGHKRITPYLIPAMIANTPSGYVSIENNIRGISLGMLSACATSGNTIGEAYRYIKYKE 239
+ +KRI PY +P ++ N +G VSI+ N+RG+S + +ACAT N+IG+A+ +I+
Sbjct: 146 FHNDNKRINPYFVPKILTNMAAGNVSIKFNLRGLSHSVSTACATGNNSIGDAFNFIRLGM 205
Query: 240 YDVMICGGTEASITPISFAGFNSLKALCTGYNDNPKKGCRPFDLKRSGFVMGEGSGILIL 299
D+ + G +E S+ P+S AGF K++ T RPFD +RSGFV+GEG G++++
Sbjct: 206 QDICVAGASETSLHPLSLAGFIRAKSITTNGIS------RPFDTQRSGFVLGEGCGMIVM 259
Query: 300 ESYEHAIKRNAPIYGEIISYSSECDAYHITAPEPNGKGLTNSIHKALKNANININDVKYI 359
ES EHA KRNA I E++ Y DA HIT+P +G G +I ALK A + DV Y+
Sbjct: 260 ESLEHAQKRNANIISELVGYGLSSDACHITSPPADGNGAKRAIEMALKMARLEPTDVDYV 319
Query: 360 NAHGTSTNLNDKIETKVFKNVF---KDHAYKLYISSTKSMTGHCIGAAGAIESIVCLKTM 416
NAH TST L DK E + + + LYISS K GH +GA GA+ESI + ++
Sbjct: 320 NAHATSTLLGDKAECLAVASALLPGRSKSKPLYISSNKGAIGHLLGARGAVESIFTICSL 379
Query: 417 QTNIIPPTINYE----YKDPDCD-LNYTPNKYIHAKENIDISLNTNLGFGGHNTALLFKK 471
+ + +P T+N + ++ + D L++ +K I N +L + GFGG NT+LLFKK
Sbjct: 380 KDDKMPHTLNLDNVLTLENNEADKLHFIRDKPI-VGANPKYALCNSFGFGGVNTSLLFKK 438
Score = 15.8 bits (29), Expect = 3.2
Identities = 5/8 (62%), Positives = 8/8 (100%)
Query: 451 DISLNTNL 458
DI++NT+L
Sbjct: 112 DITINTSL 119
Score = 15.0 bits (27), Expect = 5.5
Identities = 8/26 (30%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Query: 81 NIINGYTSIDKITKFDITGMSCGIGS 106
N+ G SI KF++ G+S + +
Sbjct: 164 NMAAGNVSI----KFNLRGLSHSVST 185
Score = 14.6 bits (26), Expect = 7.1
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 97 ITGMSC 102
ITG+ C
Sbjct: 7 ITGLGC 12
Lambda K H
0.317 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 504
Number of extensions: 22
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 474
Length of database: 442
Length adjustment: 33
Effective length of query: 441
Effective length of database: 409
Effective search space: 180369
Effective search space used: 180369
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)
S2: 25 (14.2 bits)