Query= PFI0155c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ras family
GTP-ase, putative
(197 letters)
>YML001W YPT7 SGDID:S000004460, Chr XIII from 267174-267800,
Verified ORF, "GTPase; GTP-binding protein of the rab
family; required for homotypic fusion event in vacuole
inheritance, for endosome-endosome fusion, similar to
mammalian Rab7"
Length = 208
Score = 217 bits (552), Expect = 1e-61
Identities = 105/169 (62%), Positives = 134/169 (79%), Gaps = 2/169 (1%)
Query: 10 VGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEQI-TMQIWDTAGQERFQSLGVAF 68
VGKTSLM++YVN K++ QYKATIGADFLTKE VD +++ TMQ+WDTAGQERFQSLGVAF
Sbjct: 19 VGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAF 78
Query: 69 YRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPENFPFVIIGNKVDETNKRKVQS 128
YRGADCCVLV+D+TN ++E+++SW+DEFL+ A+ PE FPFVI+GNK+D +K+ S
Sbjct: 79 YRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVS 138
Query: 129 LKVLQ-WCKSNNNIPYFETSAKNAINVDQAFDEIARKAMKQEHQEEQIY 176
K Q KS +IP F TSAKNAINVD AF+EIAR A++Q + + +
Sbjct: 139 EKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQADTEAF 187
Lambda K H
0.317 0.131 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 149
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 208
Length adjustment: 21
Effective length of query: 176
Effective length of database: 187
Effective search space: 32912
Effective search space used: 32912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.6 bits)
S2: 19 (11.9 bits)