Query= PFI0355c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ATP-dependent
heat shock protein, putative
(922 letters)
>YBR227C MCX1 SGDID:S000000431, Chr II from 675129-673567, reverse
complement, Verified ORF, "Mitochondrial ATP-binding
protein, possibly a mitochondrial chaperone with
non-proteolytic function; similar to bacterial ClpX
proteins"
Length = 520
Score = 75.5 bits (184), Expect = 8e-18
Identities = 106/481 (22%), Positives = 206/481 (42%), Gaps = 82/481 (17%)
Query: 459 VLKEEIKSDDSKINFQMKNGK--SSKKCLYPHEIVEYLNKYII-GQSEAKKVVANALRQ- 514
VL + + +IN + K G+ ++ + +I + ++ I G SE+K N RQ
Sbjct: 59 VLSVAVYNHYLRINDKQKKGELQRQRELMEREKIADDRDEPIFSGNSESKAGWRNLQRQF 118
Query: 515 RWRRIQVSDDMKKDIIPKNILMIGPTGVGKTEIARRISMFVDAPFIKVEATKFTEVGFHG 574
+V +D+ ++ N+L++GP+G GKT +A ++ ++ P + T+ T+ G+ G
Sbjct: 119 NLAGREVDEDL--ELSKSNVLVVGPSGSGKTLLATTLAKILNVPIAITDCTQLTQAGYIG 176
Query: 575 KDVDQIIKDLVEIAVKRQKTKFEIEIREQAEETVENIILYSLLGNIKEEEKNIWRKYLKD 634
+DV E+ ++R E ++ +AE+ II+ + + + +I K +
Sbjct: 177 EDV--------EVCIERLLVNAEFDVA-RAEK---GIIVLDEIDKLAKPAASIGTKDV-- 222
Query: 635 GSLDDKVISIDIPNYINNNIFSNDSVENAVKEALSNHQNIKSVKI-IHQNINKQSDKKTM 693
S + V+ ++ + + H+ +VK + +I+ Q ++ T
Sbjct: 223 ---------------------SGEGVQQSLLKIIEGHKVEITVKRPVKHDIDGQKNQTTT 261
Query: 694 TIREARQKLLQLEIDSSINQDTILKTAINSVEEEGIVFIDEIDKI--CSKSNSSYNGPDA 751
E +D+S N ++ A +++ + I+++ KI +S S N +
Sbjct: 262 KKDEV------FVVDTS-NILFMIMGAFVGLDKHIVKRIEDMKKIQKAGESVESSNSKEV 314
Query: 752 SAEGVQRDLLPLIEGCVINTKYGNINTNYILFIASG----AFQRVKPNDMLN-----ELQ 802
E + K+ NT + + +G A P D+++ EL
Sbjct: 315 EKERAK--------------KFRFSNTLEQVELDNGKKVCALDLTTPTDLVSFGLIPELI 360
Query: 803 GRLPVHVTLSSLTIKDFIDILTKTHNNLLQQNIALLKTEGIDLKFTDDAIETIANAAHDM 862
GR+P+ L L D IL + N LL Q + K G+ L T A++ +A A
Sbjct: 361 GRVPIITALQPLQRDDLFHILKEPKNALLDQYEYIFKQFGVRLCVTQKALKKVAQFA--- 417
Query: 863 NFYVENIGVRRLHTIIEKIMEDINYDVYNYVNQSIVIDK---DKVNKSLEGFIKQYDLKK 919
E G R L I+E+++ ++NYD ++ID+ D + ++ Q D+K
Sbjct: 418 --LKEGTGARGLRGIMERLLLNVNYDCPGSNIAYVLIDEATVDSLQETEHSLASQVDVKY 475
Query: 920 Y 920
Y
Sbjct: 476 Y 476
Score = 21.6 bits (44), Expect = 0.14
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 301 TCDDTTSCTHSKNTRSDKKTDASISGKDDIVRDSYSSDKK 340
T D HS ++ D K + KD ++RD DKK
Sbjct: 456 TVDSLQETEHSLASQVDVKYYSG-DEKDSLIRDVSEEDKK 494
Lambda K H
0.313 0.132 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 889
Number of extensions: 49
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 922
Length of database: 520
Length adjustment: 39
Effective length of query: 883
Effective length of database: 481
Effective search space: 424723
Effective search space used: 424723
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.6 bits)
S2: 28 (15.4 bits)