Query= PFI0415c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal RNA
methyltransferase, putative
(507 letters)
>YBR061C TRM7 SGDID:S000000265, Chr II from 365717-364785, reverse
complement, Verified ORF, "2'-O-ribose
methyltransferase, methylates the 2'-O-ribose of
nucleotides at positions 32 and 34 of the tRNA anticodon
loop"
Length = 310
Score = 166 bits (421), Expect = 8e-46
Identities = 105/301 (34%), Positives = 150/301 (49%), Gaps = 91/301 (30%)
Query: 1 MGKLSKDRRDIYYRKAKESGYRARSSFKLIQINEKFGILKLFKPDIYNCNNEKDLINIYN 60
MGK SKD+RD+YYRKAKE GYRARS+FKL+Q+N++F L +
Sbjct: 1 MGKSSKDKRDLYYRKAKEQGYRARSAFKLLQLNDQFHFL--------------------D 40
Query: 61 EHYCYNIVDLCAAPGSWSQVLKNICLYNYYQILYMXXXXXXXXXXXXXQHEEFLNKFSLY 120
+ +VDLCAAPGSWSQV
Sbjct: 41 DPNLKRVVDLCAAPGSWSQV---------------------------------------- 60
Query: 121 INYNEELENKIKNLKIKCSNIKEPNIVAVDLQEIGNMNYVKIIQGDITKMSTIDKILKCM 180
L K+ + + S+ ++ IV+VDLQ + + +V +Q DIT T+ +ILK
Sbjct: 61 ------LSRKLFD-ESPSSDKEDRKIVSVDLQPMSPIPHVTTLQADITHPKTLARILKLF 113
Query: 181 NNKINSDEENVNVFYNMEQQKKENNFSYAHTVVSDGAPDITGMNDIDEFIQSQLILSSLK 240
N+ A V SDGAPD+TG++D+DE++Q QLI+S+L+
Sbjct: 114 GNE------------------------KADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQ 149
Query: 241 VCCSVLKVGGNFISKIFRGEHTGLLILHLNKFFQRVYICKPQSSRNKSLESFLVCLNFSL 300
+ +LK GG F++KIFRG +L L F ++ KP+SSR SLE+F+VCL ++
Sbjct: 150 LTACILKKGGTFVAKIFRGRDIDMLYSQLGYLFDKIVCAKPRSSRGTSLEAFIVCLGYNP 209
Query: 301 P 301
P
Sbjct: 210 P 210
Score = 16.2 bits (30), Expect = 1.8
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 214 SDGAPDITGMNDIDEFIQ 231
S+ P + +DEF Q
Sbjct: 211 SNWTPKLDVNTSVDEFFQ 228
Lambda K H
0.317 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 415
Number of extensions: 15
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 507
Length of database: 310
Length adjustment: 31
Effective length of query: 476
Effective length of database: 279
Effective search space: 132804
Effective search space used: 132804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.9 bits)
S2: 24 (13.9 bits)