>YNL062C GCD10 SGDID:S000005006, Chr XIV from 510213-508777, reverse
           complement, Verified ORF, "Subunit of tRNA
           (1-methyladenosine) methyltransferase with Gcd14p,
           required for the modification of the adenine at position
           58 in tRNAs, especially tRNAi-Met; first identified as a
           negative regulator of GCN4 expression"
          Length = 478

 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 28/98 (28%), Positives = 60/98 (61%), Gaps = 3/98 (3%)

Query: 59  KKNTSKLDIDNNIDIEGTNKDIY-YNNNSQKLTEENIHELKENNYENPYEVIQKLVDNSS 117
           K+ +  L++ ++ID   TN+++    + +Q+LT E I ++K+ +  +  E+I K++ +  
Sbjct: 109 KEKSVSLEL-SSIDSSATNQNLVNMGSKAQELTVEEIEKMKQESLSSK-EIIDKIIKSHK 166

Query: 118 TFKEKTIISKFKYIEKKLKRHFCQFTIYECNISNLVRF 155
           +F  KT+ S+ KY+ +K ++    FT+   + SNL++F
Sbjct: 167 SFHNKTVYSQEKYVNRKKQKFAKYFTVEYLSSSNLLQF 204

 Score = 19.2 bits (38), Expect = 0.41
 Identities = 9/33 (27%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 74  EGTNKDIY-YNNNSQKLTEENIHELKENNYENP 105
           E  N D+  + N S+K  +E++H +   ++  P
Sbjct: 275 EHANLDLLKFANYSEKFIKEHVHTISLLDFFEP 307

 Score = 15.8 bits (29), Expect = 4.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 296 GIKKNTNILKIRILNS 311
           G KKN+   K+R  N+
Sbjct: 330 GGKKNSYYRKLRWYNT 345

Lambda     K      H
   0.316    0.133    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 563
Number of extensions: 31
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 616
Length of database: 478
Length adjustment: 35
Effective length of query: 581
Effective length of database: 443
Effective search space:   257383
Effective search space used:   257383
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)