Query= PFI0860c Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) ATP-dependant RNA helicase, putative (820 letters)
>FBgn0033160 type=protein;
           loc=2R:join(3275033..3275085,3275140..3275933,
           3276213..3276686,3276752..3277015,3277583..3277705,
           3277773..3278126,3278185..3278312); ID=FBpp0088040;
           name=CG11107-PA; parent=FBgn0033160,FBtr0088966;
           dbxref=FlyBase:FBpp0088040,
           FlyBase_Annotation_IDs:CG11107-PA,GB_protein:AAF59269.1,
           GB_protein:AAF59269;
           MD5=b1505c072857fdae5e3c1d96813f4446; release=r5.1;
           species=Dmel; length=729;
          Length = 729

 Score =  753 bits (1945), Expect = 0.0
 Identities = 380/683 (55%), Positives = 498/683 (72%), Gaps = 9/683 (1%)

Query: 139 NEDDSMINKLTNQKYSQRYLQLLEEKKKLPAWSAXXXXXXXXXXXXVLIIVGDTGSGKTT 198
           N+    +N LTN  YSQRY  L +++  LP +               +++VG+TGSGKTT
Sbjct: 44  NKQPPTMNPLTNTPYSQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTT 103

Query: 199 QISQFVLESKYTE-KKSIAVTQPXXXXXXXXXXXXXEELDVELGTYVGYTIRFEDKSSNK 257
           QI Q+ ++   ++ +K ++ TQP             EE+DV+LG  VGY+IRFED S+ K
Sbjct: 104 QIPQWCVDFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAK 163

Query: 258 TIIKYLTDGMLLRESMSDPLLTKYNTIILDEAHERTLATDILFGVIKNIQEKRNDLKLIV 317
           T++KY+TDGMLLRE+MSDP+L +Y  I+LDEAHERTLATDIL GV+K +  +R+DLKL+V
Sbjct: 164 TLLKYMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVV 223

Query: 318 MSATLDAEKFQKFFNNSKILNIPGRLFPVEIFYTLQAEKDYVKVVIRTVYDIHINEE-EG 376
           MSATLDA KFQ++F+N+ ++ +PGR  PVEIFYT + E+DY++  IRTV  IH+ EE EG
Sbjct: 224 MSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEG 283

Query: 377 DILVFLTGXXXXXXXXXXXXRVVSR-NMNAGQXXXXXXXXXXXXAQQQKIFEPPPKPRFK 435
           DIL+FLTG            R +       G+              QQ+IFEP P P   
Sbjct: 284 DILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNAN 343

Query: 436 GDKNGRKCILATNIAETSITIDGIVYVIDPGFSKQKVYNPRARIESLLIAPISKASAEQR 495
           G   GRK +++TNIAETS+TIDG+V+VIDPGF+KQKVYNPR R+ESLL++PISKASA+QR
Sbjct: 344 G-AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQR 402

Query: 496 AGRAGRTKPGKCFRLYTEKCFEETLPEQTYPEILRSNLGSVVLNLKKLGIDDLVHFDFMD 555
           +GRAGRT+PGKCFRLYTEK F+  + + TYPEILRSNLG+VVL LKKLGIDDLVHFDFMD
Sbjct: 403 SGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMD 462

Query: 556 PPAPETLMRALEQLNYLGALDDEGDLTNKGHLMSEFPVDPQLAKVLIESPNYSCSSEILT 615
           PPAPETLMRALE LNYL ALDD+G+LT+ G +MSEFP+DPQLAK+LI S  ++CS+EIL+
Sbjct: 463 PPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILS 522

Query: 616 IAAMLSVPNCFLRPKVKVKEADEMKMRFSHLDGDHLTLLNVFHAYVKHALVDTNESKKFC 675
           I AMLSVP CF+RP    K ADE KMRF+H+DGDHLTLLNV+HA+ +     ++E   +C
Sbjct: 523 ITAMLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQ-----SSEDPNWC 577

Query: 676 FEYFLNHRAMTSAQNVRQQLLRIMERLNLKILSIKPSNPEYYINIRKALLSGFYQQVAYK 735
           +E F+N R++ SA NVRQQL RIM+R NL+  S + ++ +YY+NIRKAL+ GF+ QVA+ 
Sbjct: 578 YENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHL 637

Query: 736 TTKGYYITVKDIQMVTLHPSTVFQMNPEWVVYHELLLTSKNFIRTVTKIEGKWLLEIAPN 795
              GYY+T+KD Q V LHPST     P+WV+Y+E +LT+KN+IRTVT ++ +WL  +AP 
Sbjct: 638 ERTGYYLTIKDNQNVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQ 697

Query: 796 YYNLEDLPNSEAKNDLKMLHKKL 818
           YY+L + P  EAK  L++L ++L
Sbjct: 698 YYDLNNFPQCEAKRQLELLQQRL 720
Lambda     K      H
   0.316    0.134    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1317
Number of extensions: 37
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 820
Length of database: 729
Length adjustment: 41
Effective length of query: 779
Effective length of database: 688
Effective search space:   535952
Effective search space used:   535952
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.1 bits)
S2: 29 (15.8 bits)