Query= PFI0930c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) Nucleosome
assembly protein
(269 letters)
>FBgn0014879 type=protein;
loc=3R:join(11089409..11089666,11090075..11090264,
11090327..11090677,11090741..11090751); ID=FBpp0082521;
name=Set-PA; parent=FBgn0014879,FBtr0083062;
dbxref=FlyBase:FBpp0082521,
FlyBase_Annotation_IDs:CG4299-PA,GB_protein:AAF55155.1,
GB_protein:AAF55155;
MD5=fca8022dabee2e6182541947b6581e77; release=r5.1;
species=Dmel; length=269;
Length = 269
Score = 104 bits (259), Expect = 2e-27
Identities = 62/206 (30%), Positives = 112/206 (54%), Gaps = 15/206 (7%)
Query: 22 NDDPLMPFMQDFEDIQKDIEQLDIKCAHEQMNIQKQYDEKKKPLFEKRDEIIQKIPGFWA 81
N++ ++ + Q +I+ L+ K + E + ++++Y++ +KP +EKR E++++IP FW
Sbjct: 25 NNEEESEALEQIDACQNEIDALNEKASEEILKVEQKYNKLRKPCYEKRSELVKRIPNFWV 84
Query: 82 NTLRKHPALSDIV-PEDIDILNHLVKLDLKDNMDNNGSYKITFIFGEKAKEFMEPLTLVK 140
+ HP +S I+ E+ + L+ L KL++++ D Y+I F F E + LT
Sbjct: 85 TSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYFENKVLTKEF 144
Query: 141 HV----TFDNNQEKVVECTRIKWKEGKNPIAAVT----HNRSDLDNEIPKWSIFEWFT-- 190
H+ +N T IKWKEGKN + + N+ ++E + F+WF+
Sbjct: 145 HLNSAAASENGDWPASTSTPIKWKEGKNLLKLLLTKPYGNKKKRNSEYK--TFFDWFSDN 202
Query: 191 TDELQDKPDVGELIRREIWHNPLSYY 216
TD + D ++ ELI+ ++W NPL YY
Sbjct: 203 TDPVND--EIAELIKDDLWPNPLQYY 226
Score = 16.5 bits (31), Expect = 0.62
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 70 DEIIQKIPG-FWANTLRKHPALSDIVPEDIDILNHLVKLDLKDNMDNN 116
DEI + I W N L+ + +VP DI++ D +DN DN+
Sbjct: 208 DEIAELIKDDLWPNPLQYY-----LVP-DIEVEPE----DEEDNEDND 245
Score = 15.8 bits (29), Expect = 1.1
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 11 ENTDPKHTKI 20
+NTDP + +I
Sbjct: 201 DNTDPVNDEI 210
Score = 12.7 bits (21), Expect = 9.0
Identities = 6/23 (26%), Positives = 8/23 (34%)
Query: 13 TDPKHTKIENDDPLMPFMQDFED 35
T P K + + F F D
Sbjct: 179 TKPYGNKKKRNSEYKTFFDWFSD 201
Lambda K H
0.316 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 234
Number of extensions: 24
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 269
Length of database: 269
Length adjustment: 25
Effective length of query: 244
Effective length of database: 244
Effective search space: 59536
Effective search space used: 59536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)