Query= PFI1435w Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) RNA binding function, putative (289 letters)
>FBgn0037701 type=protein;
           loc=3R:complement(5331866..5331921,5331980..5333108,
           5334013..5334151,5335158..5335732); ID=FBpp0081601;
           name=CG9373-PA; parent=FBgn0037701,FBtr0082123;
           dbxref=FlyBase:FBpp0081601,
           FlyBase_Annotation_IDs:CG9373-PA,GB_protein:AAF54387.1,
           GB_protein:AAF54387;
           MD5=dc68983fbe3fceaa9fb39c681c9eae55; release=r5.1;
           species=Dmel; length=632;
          Length = 632

 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 12/113 (10%)

Query: 187 QNNFFDKNMALYNNSTKNIYDTHKN------------NTIIVTNVPTYLNAEDIFSAFQE 234
           +NNF   +    N+S  N+Y    +            N + V N+   ++ + +   F+ 
Sbjct: 195 RNNFNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFKL 254

Query: 235 TGKIIDVQILMNEKRKLTGIVSIEYEKNESASDAVRMYDGGFLNDNRIRVFLD 287
            GK+  V + ++++    G   IEY+    A  A+ M D   L D R+ V LD
Sbjct: 255 AGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLD 307

 Score = 34.3 bits (77), Expect = 7e-06
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)

Query: 177 YNNMPPANAYQNNFFDKNMALYNNSTKN-IYDTHKNNTIIVTNVPTYLNAEDIFSAFQET 235
           YN   P + Y       N+   N  + N +  + K++TII+ NVP     + +   F+E 
Sbjct: 530 YNTGNPLDVYGGG---SNVGNSNVGSANAVGASRKSDTIIIKNVPITCTWQTLRDKFREI 586

Query: 236 GKIIDVQILMNEKRKLTGIVSIEYEKNESASDAVRMYDGGFLNDNRIRV 284
           G +   +I  N+     G+V   + K   A  A+ + DG  L+   I+V
Sbjct: 587 GDVKFAEIRGND----VGVV--RFFKERDAELAIALMDGSRLDGRNIKV 629

 Score = 27.3 bits (59), Expect = 0.001
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 210 KNNTIIVTNVPTYLNAEDIFSAFQE-TGKIIDVQILMNEKRKLTGIVSIEYEKNESASDA 268
           +N  + ++N+P     +D+   F+   G I  VQ+  +E  K  G   +E++  E+   A
Sbjct: 55  RNCRVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKA 114

Query: 269 V 269
           +
Sbjct: 115 L 115

 Score = 20.4 bits (41), Expect = 0.11
 Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 8/65 (12%)

Query: 46  HSIIISNVNSK--NLELYKKEFSKFGKIYNI-----YHDNEKKITYVKYDNKNSCDTAIS 98
           + + ++N++ K  N +L K+ F   GK+ ++        N +    ++YD+      AIS
Sbjct: 232 NKVFVANLDYKVDNKKL-KQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAIS 290

Query: 99  TMNNQ 103
            ++ Q
Sbjct: 291 MLDRQ 295

 Score = 16.9 bits (32), Expect = 1.2
 Identities = 5/12 (41%), Positives = 9/12 (75%)

Query: 178 NNMPPANAYQNN 189
           +N+PP+N   +N
Sbjct: 466 DNLPPSNVGLSN 477

 Score = 14.6 bits (26), Expect = 6.1
 Identities = 5/15 (33%), Positives = 11/15 (73%)

Query: 5   NKIDMSLDELIEKEN 19
           N+ +++  EL+ KE+
Sbjct: 119 NRYEVNGRELVVKED 133

 Score = 14.6 bits (26), Expect = 6.1
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 7   IDMSLDE 13
           +D+SLD+
Sbjct: 261 VDLSLDK 267
Lambda     K      H
   0.315    0.132    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 418
Number of extensions: 32
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 8
Length of query: 289
Length of database: 632
Length adjustment: 32
Effective length of query: 257
Effective length of database: 600
Effective search space:   154200
Effective search space used:   154200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)
S2: 25 (14.2 bits)