Query= PFI1505c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(911 letters)
>YKR084C HBS1 SGDID:S000001792, Chr XI from 598532-596697, reverse
complement, Verified ORF, "GTP binding protein with
sequence similarity to the elongation factor class of G
proteins, EF-1alpha and Sup35p; associates with Dom34p,
and shares a similar genetic relationship with genes
that encode ribosomal protein components"
Length = 611
Score = 63.5 bits (153), Expect = 4e-14
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Query: 145 LNVLVLGHIDAGKSTLIGALLYNLNYVSEQTIKKYEHVRE-----SAKYTYILDEEEDER 199
L+ +VLGH+DAGKSTL+G LLY+LN V++ ++K + E S K+ +I+D+ +ER
Sbjct: 168 LSFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEER 227
Query: 200 ERNITL 205
ER +T+
Sbjct: 228 ERGVTV 233
Score = 35.8 bits (81), Expect = 8e-06
Identities = 54/220 (24%), Positives = 80/220 (36%), Gaps = 52/220 (23%)
Query: 192 LDEEEDERERNITLFNKRKEFYIYY-----TKD----DI--------------------- 221
LDEEE E ERN N K YY TK DI
Sbjct: 119 LDEEESEGERNGEEANDEKTVQRYYKTTVPTKPKKPHDISAFVKSALPHLSFVVLGHVDA 178
Query: 222 -------KLAYDI-IRNENDYNNDEQEKQNIGKYTNKNIYVNKNIFEDFYKRKVIHDDVI 273
+L YD+ I N++ ++E + +GK + K ++ E+ + + I
Sbjct: 179 GKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERGVTVS---I 235
Query: 274 CIKKIN-------IFDTPGHNELVNNLHTCSFYADCAILVVD-GNNIYNKKND---ETYR 322
C + I D PGH + V N AD AIL VD N + D +T
Sbjct: 236 CTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNAFESGFDLDGQTKE 295
Query: 323 NVCILKSXXXXXXXXXXXKLDLFDYDIKVFQHICSIIKSY 362
++ + S K+D D+ + F+ I S + Y
Sbjct: 296 HMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPY 335
Score = 16.2 bits (30), Expect = 6.8
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 857 ICAQYFREEFKYFISLDTP 875
IC +F F +D P
Sbjct: 235 ICTSHFSTHRANFTIVDAP 253
Lambda K H
0.320 0.138 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1080
Number of extensions: 59
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 911
Length of database: 611
Length adjustment: 40
Effective length of query: 871
Effective length of database: 571
Effective search space: 497341
Effective search space used: 497341
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.3 bits)
S2: 29 (15.8 bits)