Query= PFI1545c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) proteasome
precursor, putative
(282 letters)
>YJL001W PRE3 SGDID:S000003538, Chr X from
435079-435143,435260-435842, Verified ORF, "20S
proteasome beta-type subunit, responsible for cleavage
after acidic residues in peptides"
Length = 215
Score = 77.4 bits (189), Expect = 2e-19
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 157 PLVENVAHITKKIIYTNNNFLSCALIFGGYDKIKKQQLYAVNLNGSIIEKHDFAVSGSGS 216
P E A + K++ Y N + L+ +I GYD K ++Y + L GS+ K +A++GSGS
Sbjct: 92 PSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSV-HKLPYAIAGSGS 150
Query: 217 IYIQSYLQDKYKKFMTKKECFNLILNCVKYAMHNDNSSGGLIRIVNITKSFVE 269
+I Y +++ M+K+E + I + + A+ D SSGG+IR+V +T + VE
Sbjct: 151 TFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVE 203
Score = 64.7 bits (156), Expect = 2e-15
Identities = 25/69 (36%), Positives = 52/69 (75%)
Query: 24 KTPISDGTTIIGIIYDNGVMLACDSRTSSGTFISNKCSRKINRINENLYVCRSGASAHSQ 83
K +S GT+I+ + + +GV+L DSRT++G +I+N+ + K+ R+++ ++ CRSG++A +Q
Sbjct: 13 KGEVSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQ 72
Query: 84 KIIEIIKHY 92
I +I++++
Sbjct: 73 AIADIVQYH 81
Score = 15.4 bits (28), Expect = 1.1
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 12/41 (29%)
Query: 51 SSGTFISNKCSRKINRINENLYVCRSGASAHSQKIIEIIKH 91
S TFI C + EN+ ++ ++ IKH
Sbjct: 148 SGSTFIYGYCDK---NFRENM---------SKEETVDFIKH 176
Score = 14.2 bits (25), Expect = 2.5
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 249 HNDNSSGGLIRIVNITKSFVEEFTV 273
+ DN + G+I K+ E +T+
Sbjct: 108 NKDNLTAGIIVAGYDDKNKGEVYTI 132
Score = 13.5 bits (23), Expect = 4.3
Identities = 5/12 (41%), Positives = 5/12 (41%)
Query: 92 YCVSMKNENRKK 103
YC EN K
Sbjct: 156 YCDKNFRENMSK 167
Lambda K H
0.319 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 160
Number of extensions: 11
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 282
Length of database: 215
Length adjustment: 24
Effective length of query: 258
Effective length of database: 191
Effective search space: 49278
Effective search space used: 49278
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.1 bits)
S2: 20 (12.3 bits)