Query= PFL0150w Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding) origin
recognition complex 1 protein
(1189 letters)
>FBgn0022772 type=protein;
loc=2R:complement(3410189..3410778,3410842..3411720,
3411786..3413091); ID=FBpp0088033; name=Orc1-PA;
parent=FBgn0022772,FBtr0088959;
dbxref=GB_protein:AAF59236.1,FlyBase:FBpp0088033,
FlyBase_Annotation_IDs:CG10667-PA,GB_protein:AAF59236;
MD5=98a659e71b60f6daf7cd46dd183a6ff5; release=r5.1;
species=Dmel; length=924;
Length = 924
Score = 192 bits (488), Expect = 1e-52
Identities = 117/300 (39%), Positives = 171/300 (57%), Gaps = 8/300 (2%)
Query: 765 KDPTDKAIRMMQLDVVPKYLPCREKEIKEVHGFLESGIKQSGSNQILYISGMPGTGKTAT 824
K A + + VVPK LPCRE+E + ++ FLE I Q +Y+SG+PGTGKTAT
Sbjct: 549 KSELQLAREQLHVSVVPKSLPCREREFENIYAFLEGKI-QDQCGGCMYVSGVPGTGKTAT 607
Query: 825 VYSVIQLLQIKSRKKLLPSFNVFEINGMNVVHPNAAYQVFYKQLFNKKPPNALNSFKIID 884
V VI+ LQ +++ LP+F EINGM + P AY YKQL K + + +++
Sbjct: 608 VTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQL-TGKTVSWEQAHALLE 666
Query: 885 RLFNKSQKDNRDVSILIIDEIDYLITKTQKVLFTLFDWPTKINSKLILIAISNTMDLPDR 944
+ F + R ++L++DE+D L + Q V++ L DWPTK +KL+++ I+NTMDLP+R
Sbjct: 667 KRFT-TPAPRRVTTVLLVDELDILCNRRQDVVYNLLDWPTKSAAKLVVVTIANTMDLPER 725
Query: 945 LI-PRCRSRLAFGRLVFSPYKGDEIEKIIKERLENCKEIIDHTAIQLCARKVANVSGDIR 1003
L+ + SRL RL F PY ++++I+ RL E A+QL ARKVA VSGD R
Sbjct: 726 LLMGKVTSRLGLTRLTFQPYSHKQLQEIVTARLGG-SETFKGEAVQLVARKVAAVSGDAR 784
Query: 1004 KALQICRKAFE--NKRGHKIVPR-DITEATNQLFDSPLTNAINYLPWAFKIFLTCLIIEL 1060
+AL ICR+A E + K V + +A ++ S AI +IFL + E+
Sbjct: 785 RALDICRRATEIADTAAVKCVTMLHVQQALAEMIASAKVQAIRNCSRMEQIFLQAIAAEV 844
Score = 19.2 bits (38), Expect = 1.6
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 102 QNKQTIKYNDNKFTPINKKEK 122
++K+T++ ND ++P +K
Sbjct: 468 RSKKTVQDNDEDYSPKKSVQK 488
Score = 18.9 bits (37), Expect = 2.1
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 466 ESIQINDEEYS 476
+++Q NDE+YS
Sbjct: 471 KTVQDNDEDYS 481
Score = 17.7 bits (34), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1149 QVSPDIDKESGDMGIELNV 1167
Q +PD S DM I+L +
Sbjct: 339 QQTPDPKTPSNDMKIKLRL 357
Score = 17.3 bits (33), Expect = 6.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 15 DNEILSPTKKG 25
D+EI+S K+G
Sbjct: 457 DDEIISTPKRG 467
Lambda K H
0.316 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1568
Number of extensions: 68
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 1189
Length of database: 924
Length adjustment: 45
Effective length of query: 1144
Effective length of database: 879
Effective search space: 1005576
Effective search space used: 1005576
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.5 bits)
S2: 32 (16.9 bits)