Query= PFL0210c Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding) eukaryotic
initiation factor 5a, putative
(161 letters)
>YEL034W HYP2 SGDID:S000000760, Chr V from 85676-86149, Verified
ORF, "Translation initiation factor eIF-5A, promotes
formation of the first peptide bond; similar to and
functionally redundant with Anb1p; undergoes an
essential hypusination modification; expressed under
aerobic conditions"
Length = 157
Score = 177 bits (450), Expect = 5e-50
Identities = 86/159 (54%), Positives = 118/159 (74%), Gaps = 8/159 (5%)
Query: 1 MSDHE-MYDNIDAGASQTYPVQAGAIKKNGHVMLKEHPCKVVDYSTSKTGKHGHAKAHIV 59
MSD E ++ DAG+S TYP+Q A++KNG V++K PCK+VD STSKTGKHGHAK H+V
Sbjct: 1 MSDEEHTFETADAGSSATYPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLV 60
Query: 60 GIDIFTGRKYEDICPTSHNMDVPVVKRTELQLIDITEDGFVSLLYDNGDTKDDLSLPKDT 119
IDIFTG+K ED+ P++HNM+VPVVKR E QL+DI +DGF+SL+ +GDTKDD+ P+
Sbjct: 61 AIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDI-DDGFLSLMNMDGDTKDDVKAPE-- 117
Query: 120 EGNLDEVAKQIRNLFDNGKSVLVSVLSACGQEKIIAAKE 158
E+ ++ FD GK ++V+++SA G+E I+ KE
Sbjct: 118 ----GELGDSLQTAFDEGKDLMVTIISAMGEEAAISFKE 152
Lambda K H
0.314 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 115
Number of extensions: 7
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 157
Length adjustment: 17
Effective length of query: 144
Effective length of database: 140
Effective search space: 20160
Effective search space used: 20160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.6 bits)
S2: 17 (11.2 bits)