>YPR041W TIF5 SGDID:S000006245, Chr XVI from 648701-649918, Verified
           ORF, "Translation initiation factor eIF-5; N-terminal
           domain functions as a GTPase-activating protein to
           mediate hydrolysis of ribosome-bound GTP; C-terminal
           domain is the core of ribosomal preinitiation complex
           formation"
          Length = 405

 Score =  137 bits (344), Expect = 1e-36
 Identities = 62/143 (43%), Positives = 95/143 (66%), Gaps = 1/143 (0%)

Query: 4   VNIPRDRNDPNYRYKMPKLISKIEGRGNGIRTNISNMGEIARSLKRPPMYPTKFFGCELG 63
           +NI RD +DP YRYKMP + +K+EGRGNGI+T + N+ +I+ +L RP  Y  K+FG ELG
Sbjct: 3   INICRDNHDPFYRYKMPPIQAKVEGRGNGIKTAVLNVADISHALNRPAPYIVKYFGFELG 62

Query: 64  TMVKFEENEEKAIVNGAHKEKDLVNILDKFIEMYVLCPHCLLPETDIVV-KKGILICKCN 122
                  ++++ +VNG H+   L ++LD FI  +VLC  C  PET+I++ K   L+  C 
Sbjct: 63  AQTSISVDKDRYLVNGVHEPAKLQDVLDGFINKFVLCGSCKNPETEIIITKDNDLVRDCK 122

Query: 123 ACGNIGELNNSHKIATYMIKNPP 145
           ACG    ++  HK++++++KNPP
Sbjct: 123 ACGKRTPMDLRHKLSSFILKNPP 145

 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 286 AEELRVLQVSQCFDSKCRVFICLCSLFEDKISKELLEKNIKYIKKINDTSVTTMDIFLAL 345
           A EL VL      D K    +  C LF++ I  E+ E N  +  KI  T     +    +
Sbjct: 276 AAELDVLN-----DPKIGCVLAQC-LFDEDIVNEIAEHNA-FFTKILVTPEYEKNFMGGI 328

Query: 346 EYYVNKVAINSLSIYPYILQVLYNNDIFESKDIIK 380
           E ++     + + + P IL  LYNNDI   ++I++
Sbjct: 329 ERFLGLEHKDLIPLLPKILVQLYNNDIISEEEIMR 363

 Score = 16.9 bits (32), Expect = 1.6
 Identities = 5/20 (25%), Positives = 12/20 (60%)

Query: 250 VLEKECLHFGSPEIKEVIER 269
           + E+E + FG+   K+ + +
Sbjct: 356 ISEEEIMRFGTKSSKKFVPK 375

Lambda     K      H
   0.319    0.137    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 471
Number of extensions: 18
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 565
Length of database: 405
Length adjustment: 34
Effective length of query: 531
Effective length of database: 371
Effective search space:   197001
Effective search space used:   197001
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)