>YOR274W MOD5 SGDID:S000005800, Chr XV from 837673-838959, Verified
           ORF, "Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl
           transferase, required for biosynthesis of the modified
           base isopentenyladenosine in mitochondrial and
           cytoplasmic tRNAs; gene is nuclear and encodes two
           isozymic forms"
          Length = 428

 Score =  124 bits (310), Expect = 1e-32
 Identities = 91/355 (25%), Positives = 166/355 (46%), Gaps = 51/355 (14%)

Query: 229 EKIIIIIGVTCSGKTKFSIDLSEQLMKYKIKSEIISADSMQVYQNFNVGIAKVEEEEMKD 288
           +K+I+I G T  GK++ SI L++     K   E+I++DSMQVY++  +   K   +E + 
Sbjct: 14  KKVIVIAGTTGVGKSQLSIQLAQ-----KFNGEVINSDSMQVYKDIPIITNKHPLQEREG 68

Query: 289 VKHHLLDVCHPNDTFNAHKYINYTIPLIKNMNRNNKIPIIAGGTLLYIESLLWESVIDIR 348
           + HH+++    ++ + +H++    +  I++++R  KIPI+ GGT  Y+++L         
Sbjct: 69  IPHHVMNHVDWSEEYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTL--------- 119

Query: 349 KEEEKKEQTYNGQIIKKEDEYLDEHLKLNNDIKCNGERNDDMVELDKYEHKTNEELYEEL 408
                    +N ++  K                 + ER     +LD  E    + +Y  L
Sbjct: 120 ---------FNKRVDTK-----------------SSERKLTRKQLDILESTDPDVIYNTL 153

Query: 409 KNIDEERANQLHKNDRKRVCRSLDIFYTYNKKHSDLXXXXXXXXXXXXXMRFFPCIFYLD 468
              D + A + H ND +RV R L+I+Y   KK S+                 F  +F   
Sbjct: 154 VKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPSETFNEQKITLK-------FDTLFLWL 206

Query: 469 YNDDDLLKMKIKNRVDLMISKGLLDEAIKLKQINNDRKLSFP--TKGINQSIAYKEFDEY 526
           Y+  + L  ++ +RVD M+ +G L E  +L +  +  K +      G+ Q I +KEF  +
Sbjct: 207 YSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQCENGVWQVIGFKEFLPW 266

Query: 527 IKKKMDNIDDQKLFEKCKDNLIRRTYKYAKKQRRWISNRFVKVYNVELNKIDVSN 581
           +  K D  D+    E C + +  RT +YAK+Q +WI    +     ++  +D ++
Sbjct: 267 LTGKTD--DNTVKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATD 319

 Score = 18.1 bits (35), Expect = 0.80
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 161 KLNGKEKNMDNSKIGK---CINTKNEEGDDELMSHKMNDMINYLNEDPMKIMNPLDITQL 217
           K NG+  N D+ ++ K    I  K+   + E + H + + +++  E      +  +   +
Sbjct: 37  KFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEE---YYSHRFETECM 93

Query: 218 NFFRDGNSQKKEKIIIIIGVT 238
           N   D    ++ KI I++G T
Sbjct: 94  NAIED--IHRRGKIPIVVGGT 112

 Score = 17.3 bits (33), Expect = 1.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 106 YSYLINNRRINTVECLRKVLNK 127
           Y   + N+R++T    RK+  K
Sbjct: 115 YLQTLFNKRVDTKSSERKLTRK 136

Lambda     K      H
   0.319    0.137    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 653
Number of extensions: 36
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 601
Length of database: 428
Length adjustment: 34
Effective length of query: 567
Effective length of database: 394
Effective search space:   223398
Effective search space used:   223398
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)