Query= PFL0560c Pf Annotation|Plasmodium_falciparum_Stanford|(protein coding) minichromosome maintenance protein, putative (1024 letters)
>YBL023C MCM2 SGDID:S000000119, Chr II from 177529-174923, reverse
           complement, Verified ORF, "Protein involved in DNA
           replication; component of the Mcm2-7 hexameric complex
           that binds chromatin as a part of the pre-replicative
           complex"
          Length = 868

 Score =  153 bits (386), Expect = 6e-41
 Identities = 123/431 (28%), Positives = 193/431 (44%), Gaps = 63/431 (14%)

Query: 513 NMYGDYINEENDFNRNVHYINSSDEENENYHEKNRDNNSLHLNKEIDSKVLEFIHDMEKV 572
           N Y   +N +N F      I ++  +    +  N     L +    + +  EF     K+
Sbjct: 432 NNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEEEREF----RKI 487

Query: 573 GYNKFYL--LISSFCPRIIMNSYIKAXXXXXXXXXKTIYDDNNQIKRRGNIHNLLIGDPG 630
             ++  +  +ISS  P I  +  IK              + N +   RG+I+ LL+GDPG
Sbjct: 488 SRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVP-KNVNGKHSIRGDINVLLLGDPG 546

Query: 631 LGKSRILQYISNIMEKSLFICSTSTTINGLTACAVKDTTNNEYSLEGGALVLSDKGVCCI 690
             KS+IL+Y+     +++F      +  GLTA   KD    E++LEGGALVL+DKGVC I
Sbjct: 547 TAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLI 606

Query: 691 DELDKISLNDQQSFLECMENQSINITKAGIVCNLKTRCTIIAASNPKEA----------- 739
           DE DK++  D+ S  E ME QSI+I+KAGIV  L+ RC+IIAA+NP              
Sbjct: 607 DEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQN 666

Query: 740 ------------------DNISEEKDYHISNYLINPNKNKNDLSEDDHTQHTDFQSDDNS 781
                             D + EE D  ++ +++           D H +      +D  
Sbjct: 667 VSLTEPILSRFDILCVVRDLVDEEADERLATFVV-----------DSHVRSHPENDEDRE 715

Query: 782 KEGSYNFSESDXXXXXXXXXXXXXXXXXXXXDYSPYIFSIKDALLYKCKQINEQNYLPLE 841
            E   N  ES                     + +  + + +  L  + K+  E + +P E
Sbjct: 716 GEELKNNGES--------------AIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQE 761

Query: 842 LIGVYIKYCRKYIFPKLSEDAKKYIRKFYLHLRNLANTHNDISVPITIRQLESLIRLCQA 901
           L+  YI Y R  I+PKL +     + + Y  LR    + +  S PIT+R LES++R+ ++
Sbjct: 762 LLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRR--ESISTGSFPITVRHLESILRIAES 819

Query: 902 RARADLSHMVT 912
            A+  LS  V+
Sbjct: 820 FAKMRLSEFVS 830

 Score = 31.2 bits (69), Expect = 3e-04
 Identities = 36/161 (22%), Positives = 62/161 (38%), Gaps = 9/161 (5%)

Query: 157 NKVTIYLYNWNKVDKFESLKSEKVNQLICLRGSVLRVSPIQLLITNLNFVCDKCKCIIKV 216
           +++ + + ++  +     L+   ++ L+ + G V R + +   +  + F C KC  I+  
Sbjct: 291 SEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGP 350

Query: 217 EFMDGKFEPPKKCMTNNCDGK-QFLPIRESAKSLEYQKIILKENRKIVNNIYETNDTNIK 275
            F D   E  +     NC  K  F    E      YQ++ L+E    V          + 
Sbjct: 351 FFQDSN-EEIRISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVI 409

Query: 276 NLTVTLEASKFFVNSCIPGNYVEALGILKVISFNNSHLING 316
            L   ++ SK       PG  VE  GI K     N +  NG
Sbjct: 410 LLADLVDVSK-------PGEEVEVTGIYKNNYDGNLNAKNG 443

 Score = 25.8 bits (55), Expect = 0.014
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 519 INEENDFNRNVHYINSSDEENE 540
           +NE +   RNV YI+  DEE E
Sbjct: 116 LNERDRLLRNVAYIDDEDEEQE 137

 Score = 20.8 bits (42), Expect = 0.45
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 513 NMYGDYINEENDFNRNVHYINSSDEENENYHEKNRDNNSLH 553
           NMY DY  + N    +   ++  +++  +  E+ R +  L+
Sbjct: 77  NMYEDYAADHNRDRYDPDQVDDREQQELSLSERRRIDAQLN 117

 Score = 17.3 bits (33), Expect = 4.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 871 LHLRNLANTHNDISVPIT 888
           LH  + A  H++I V I+
Sbjct: 281 LHYPDYARIHSEIHVRIS 298

 Score = 16.5 bits (31), Expect = 8.4
 Identities = 5/10 (50%), Positives = 7/10 (70%)

Query: 124 DEIDKFGNED 133
           DE DK  ++D
Sbjct: 607 DEFDKMNDQD 616
Lambda     K      H
   0.318    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1687
Number of extensions: 73
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 1024
Length of database: 868
Length adjustment: 44
Effective length of query: 980
Effective length of database: 824
Effective search space:   807520
Effective search space used:   807520
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 31 (17.1 bits)
S2: 31 (16.5 bits)