Query= PFL0670c Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding)
Bi-functional aminoacyl-tRNA synthetase, putative
(746 letters)
>YHR020W YHR020W SGDID:S000001062, Chr VIII from 143989-146055,
Uncharacterized ORF, "Putative protein of unknown
function, has similarity to proline-tRNA ligase; YHR020W
is an essential gene"
Length = 688
Score = 520 bits (1338), Expect = e-151
Identities = 251/509 (49%), Positives = 351/509 (68%), Gaps = 9/509 (1%)
Query: 247 KDSNILGITSKKIENFSDWYTQVIVKSELIEYYDISGCYILRPAAYYIWECVQAFFNKEI 306
+D+ ++GIT K +F WY Q++ K E+++YYD+SGCYILRP +Y IWE +Q +F+ +I
Sbjct: 180 EDAKLIGITVDKALDFPGWYQQILTKGEMLDYYDVSGCYILRPPSYAIWENIQKWFDDKI 239
Query: 307 KKLNVENSYFPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDSNLPEEIAIRPTSETIMYS 366
K + V+N+YFP+FV+ LEKEK+H+EGF+PEVAWVT+ G S L E IAIRPTSET+MY
Sbjct: 240 KAIGVQNAYFPMFVSSRVLEKEKDHVEGFAPEVAWVTRAGSSELEEPIAIRPTSETVMYP 299
Query: 367 VFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFD 426
+ KW++SYRDLPLKLNQWN+VVRWEFK P PF+RTREFLWQEGHTAH ++A + V
Sbjct: 300 YYAKWVQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTAKDAEEEVLQ 359
Query: 427 ILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNF 486
ILD Y YEE LAVP++KG K+E EKF G +FT+T E +I + GR IQ ATSH+LG NF
Sbjct: 360 ILDFYAGVYEELLAVPVVKGRKTEKEKFAGGDFTTTCEGYIPQTGRGIQGATSHHLGQNF 419
Query: 487 AKMFKIEFED---ENEVKQYVHQTSWGCTTRSIGIMIMTHGDDKGLVLPPNVSKYKVVIV 543
+KMF + E+ + K + +Q SWG +TR IG+M+M H D+KGLV+PP VS+++ V++
Sbjct: 420 SKMFNLSVENPLGSDHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVSQFQSVVI 479
Query: 544 P--IFYKTTDENA--IHSYCKDIEKILKNAQINCVYDDRASYSPGYKFNHWELRGIPIRI 599
P I KT++E IH + +E LK I D +Y+PG+KF+ +EL+GIPIRI
Sbjct: 480 PVGITKKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYELKGIPIRI 539
Query: 600 EVGPKDLQNNSCVIVRRDNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDSIVQV 659
E+GPKD++ N V+VRR++++K V + + ++L ++ +LF KAK+ D V V
Sbjct: 540 ELGPKDIEKNQVVVVRRNDSKKYVVSFDELEARIPEILEEMQGDLFKKAKELFDTHRVIV 599
Query: 660 TSFSEVMNALNKKKMVLAPWCEDIATEEEIKKETQRLSLNQTNSETTLSGAM--KPLCIP 717
+S + ALNKK ++LAPWC + EE+IK+ + + + E + +M K LCIP
Sbjct: 600 NEWSGFVPALNKKNVILAPWCGVMECEEDIKESSAKKDDGEEFEEDDKAPSMGAKSLCIP 659
Query: 718 LDQPPMPPNMKCFWSGKPAKRWCLFGRSY 746
DQP + KC + A +C+FGRSY
Sbjct: 660 FDQPVLNEGQKCIKCERIAVNYCMFGRSY 688
Score = 18.1 bits (35), Expect = 1.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 8 EIIIPQEYLEKSECLFKELKEL 29
E IP+ E LFK+ KEL
Sbjct: 570 EARIPEILEEMQGDLFKKAKEL 591
Lambda K H
0.316 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1225
Number of extensions: 59
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 746
Length of database: 688
Length adjustment: 40
Effective length of query: 706
Effective length of database: 648
Effective search space: 457488
Effective search space used: 457488
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.1 bits)
S2: 29 (15.8 bits)