Query= PFL0815w Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding) DNA-binding
chaperone, putative
(939 letters)
>YGR285C ZUO1 SGDID:S000003517, Chr VII from 1063159-1061858,
reverse complement, Verified ORF, "Cytosolic
ribosome-associated chaperone, contains a DnaJ domain;
together with Ssz1p, acts as a chaperone for nascent
polypeptide chains"
Length = 433
Score = 84.3 bits (207), Expect = 1e-20
Identities = 47/149 (31%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Query: 270 EKKNIFLKIQDSYTILSDKILRKQYDSSIPFDERIPTLTQLEEAKNFYNFLRPVFKRNAK 329
++ F IQ ++ L+D R QYDS F +P + + +FY PVF+ A+
Sbjct: 140 DQDGFFKIIQKAFETLTDSNKRAQYDSC-DFVADVPPPKKGTDY-DFYEAWGPVFEAEAR 197
Query: 330 WSAIKPVPDIGDENTDIKEVKYFYDFWYNFNNWRDFSYQNEYDYEQAXXXXXXXXXXXXN 389
+S P+P +G++++ KEV+ FY FW+ F++WR F + +E + + N
Sbjct: 198 FSKKTPIPSLGNKDSSKKEVEQFYAFWHRFDSWRTFEFLDEDVPDDSSNRDHKRYIERKN 257
Query: 390 KKIQKKASKTENLRIIKLVDLAYNNDPRI 418
K + K +N R++KLV+ A + DPRI
Sbjct: 258 KAARDKKKTADNARLVKLVERAVSEDPRI 286
Score = 16.5 bits (31), Expect = 3.7
Identities = 4/9 (44%), Positives = 7/9 (77%)
Query: 508 DLCEFIYDI 516
D C+F+ D+
Sbjct: 165 DSCDFVADV 173
Lambda K H
0.315 0.133 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 756
Number of extensions: 33
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 939
Length of database: 433
Length adjustment: 38
Effective length of query: 901
Effective length of database: 395
Effective search space: 355895
Effective search space used: 355895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.6 bits)
S2: 28 (15.4 bits)