Query= PFL0960w Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding)
D-ribulose-5-phosphate 3-epimerase, putative
(227 letters)
>YJL121C RPE1 SGDID:S000003657, Chr X from 191011-190295, reverse
complement, Verified ORF, "D-ribulose-5-phosphate
3-epimerase, catalyzes a reaction in the non-oxidative
part of the pentose-phosphate pathway; mutants are
sensitive to oxidative stress"
Length = 238
Score = 189 bits (479), Expect = 5e-53
Identities = 110/241 (45%), Positives = 146/241 (60%), Gaps = 26/241 (10%)
Query: 4 LKAIIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTK 63
+K IIAPS+LAS+ + L E ++ + GA+W+H+DVMD HFVPN++ G P++ +L++
Sbjct: 2 VKPIIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVP 61
Query: 64 ------------SIFFDVHLMVEYPEKYVPLLKT--SNQLTFHFEALNEDTERCIQLAKE 109
+ FFD H+MVE PEK+V ++Q TFH+EA T+ + L K
Sbjct: 62 RPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEA----TQDPLHLVKL 117
Query: 110 IRDNNLWCGISIKPKTDVQ---KLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSF 166
I+ + +IKP T V +L P LD LVMTVEPGFGGQ FM DMM KV
Sbjct: 118 IKSKGIKAACAIKPGTSVDVLFELAPHLDM-----ALVMTVEPGFGGQKFMEDMMPKVET 172
Query: 167 LRKKYKNLNIQVDGGLNIETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQKYLN 226
LR K+ +LNIQVDGGL ET +A GAN+IVAGTS+F A DP VI M+ V K L
Sbjct: 173 LRAKFPHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELR 232
Query: 227 N 227
+
Sbjct: 233 S 233
Lambda K H
0.319 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 191
Number of extensions: 6
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 238
Length adjustment: 23
Effective length of query: 204
Effective length of database: 215
Effective search space: 43860
Effective search space used: 43860
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.1 bits)
S2: 20 (12.3 bits)