Query= PFL1300c Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding)
hypothetical protein
(495 letters)
>YEL052W AFG1 SGDID:S000000778, Chr V from 56571-58100, Verified
ORF, "Putative ATPase of the CDC48/PAS1/SEC18 (AAA)
family, localized to mitochondria"
Length = 509
Score = 32.0 bits (71), Expect = 5e-05
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 78 NDHIICNEENQVLEV--SLVRQNLLRYTDEGTYHEILLSTSNLSPTSQFIN 126
N H++C +E QV +V +++ + L+ Y +L +TSN P +IN
Sbjct: 198 NSHVLCFDEFQVTDVADAMILRRLMTALLSDDYGVVLFATSNRHPDELYIN 248
Score = 14.6 bits (26), Expect = 8.7
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 134 NHTMNNITNHTGDK 147
+HT ++ +HT K
Sbjct: 322 SHTDDSTDSHTVHK 335
Lambda K H
0.319 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 388
Number of extensions: 23
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 495
Length of database: 509
Length adjustment: 34
Effective length of query: 461
Effective length of database: 475
Effective search space: 218975
Effective search space used: 218975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.9 bits)
S2: 26 (14.6 bits)