Query= PFL1345c Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding)
hypothetical protein, conserved
(1092 letters)
>YPL086C ELP3 SGDID:S000006007, Chr XVI from 386443-384770, reverse
complement, Verified ORF, "Histone acetyltransferase
subunit of the Elongator complex, which is a component
of the RNA polymerase II holoenzyme; activity is
directed specifically towards histones H3 and H4;
disruption confers resistance to K. lactis zymotoxin"
Length = 557
Score = 183 bits (464), Expect = 3e-50
Identities = 123/412 (29%), Positives = 202/412 (49%), Gaps = 38/412 (9%)
Query: 295 IITKEMKNYK--------DL-----DKESVHFLQINKRKGVRSNSGVLVVTIITHPHKFS 341
+ITK K YK D+ D+ + L K K VR+ SG+ VV ++ PH+
Sbjct: 50 LITKYSKKYKLKQQPRLTDIINSIPDQYKKYLLPKLKAKPVRTASGIAVVAVMCKPHR-- 107
Query: 342 CKYD------CHYCPNEPNQP-----RSYLSTEPAILRANQNNFDVICQFFNRTTTLVNN 390
C + C YCP P+ +SY EP +RA + +D Q R L
Sbjct: 108 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVEQLKQL 167
Query: 391 GHVADKIEVLVLGGTWSCYDIAYQEEFIRDVYYAANIYPVLKDRRKKLTLKEEQEINEKS 450
GH DK+E +++GGT+ Y+E+FI ++ A + + + E +++S
Sbjct: 168 GHSIDKVEYVLMGGTFMSLPKEYREDFIVKLHNALSGF-------NGNDIDEAILYSQQS 220
Query: 451 NCRIIGLTLETRPDQINKDELLRLRYYGCTRVQLGIQHIDDVILKKVNRQCTLKDCIRAI 510
+ +G+T+ETRPD + L + YGCTR+++G+Q + + + + NR T++
Sbjct: 221 LTKCVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCETF 280
Query: 511 YLLKENGFKVDIHLMPDLPYSDVYKDIHMFKYVLSSTDLQADQWKIYPCEITPFTKIEKW 570
+ K+ G+KV H+MPDLP + +DI FK + D + D KIYP + T + +
Sbjct: 281 AVSKDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYEL 340
Query: 571 YNNNEYKPYFETNKNLLISVILLVKKSIHPWIRLNRVIRDIPNPSIIAGNNITNMRQLIA 630
+ YK Y + N L+ ++ + + PW R+ RV RDIP P + +G + N+R+L
Sbjct: 341 WKTGRYKSY---SANALVDLVARILALVPPWTRIYRVQRDIPMPLVTSGVDNGNLRELAL 397
Query: 631 NEMNIRNIFCQCIRCKEVKNQEIEKK--SDSIFLRIYKYPTLGGDEYFITFQ 680
M C+ +R +EV QE+ K D + L Y GG E F++++
Sbjct: 398 ARMKDLGTTCRDVRTREVGIQEVHHKVQPDQVELIRRDYYANGGWETFLSYE 449
Score = 58.9 bits (141), Expect = 1e-12
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 869 ENSALIRELHVYGSLLKHDDFKDELNFIQHKGLGKCLVLVAE-IISYFYNYKKVSIIAGV 927
+ ++++RELHVYGS++ +D F QH+G G L+ AE I + +K+S+I+GV
Sbjct: 478 QRTSIVRELHVYGSVVPLHS-RDPRKF-QHQGFGTLLMEEAERIAKEEHGSEKISVISGV 535
Query: 928 GTREYYKKLGYTKEETYVTK 947
G R YY KLGY + Y++K
Sbjct: 536 GVRNYYGKLGYELDGPYMSK 555
Score = 17.3 bits (33), Expect = 3.3
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 933 YKKLGYTKEETYVTKILKR-EEIYKNYLL 960
Y K K++ +T I+ + YK YLL
Sbjct: 54 YSKKYKLKQQPRLTDIINSIPDQYKKYLL 82
Lambda K H
0.317 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1245
Number of extensions: 53
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 1092
Length of database: 557
Length adjustment: 41
Effective length of query: 1051
Effective length of database: 516
Effective search space: 542316
Effective search space used: 542316
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.1 bits)
S2: 29 (15.8 bits)