Query= PFL1370w Pf
Annotation|Plasmodium_falciparum_Stanford|(protein coding)
NIMA-related protein kinase (Pfnek-1)
(1057 letters)
>YAR018C KIN3 SGDID:S000000071, Chr I from 171698-170391, reverse
complement, Verified ORF, "Nonessential protein kinase
with unknown cellular role"
Length = 435
Score = 156 bits (395), Expect = 3e-42
Identities = 99/289 (34%), Positives = 154/289 (53%), Gaps = 40/289 (13%)
Query: 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMR 67
G +EY+V+++IG G FG V V H T++ K I Y + +E+ QL+ E +++
Sbjct: 18 GHPPRSEYQVLEEIGRGSFGSVRKVIHIPTKKLLVRKDIKYGHMNSKERQQLIAECSILS 77
Query: 68 ELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIIDITRQL 127
+LKH+NIV + + ++ + LY+ ME+C GDLS+ I+ + I E + I QL
Sbjct: 78 QLKHENIVEFYNWDFDEQKEVLYLYMEYCSRGDLSQMIKHYKQEHKYIPEKIVWGILAQL 137
Query: 128 LHALAYCH-------------NLKDGPNGER-VLHRDLKPQNIFLS------------TG 161
L AL CH +K G+ V+HRDLKP NIFLS G
Sbjct: 138 LTALYKCHYGVELPTLTTIYDRMKPPVKGKNIVIHRDLKPGNIFLSYDDSDYNINEQVDG 197
Query: 162 IRHIGKISSQANNLN----------SRPIAKIGDFGLSKNIGIE-SMAHSCVGTPYYWSP 210
+ + + +N S+ + K+GDFGL+K++ A + VGTPYY SP
Sbjct: 198 HEEVNSNYYRDHRVNSGKRGSPMDYSQVVVKLGDFGLAKSLETSIQFATTYVGTPYYMSP 257
Query: 211 ELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFAQLISELKRG 259
E+L+ + Y SD+W+LGC+I+E+CS PF +A N+ +L +++K G
Sbjct: 258 EVLMDQ--PYSPLSDIWSLGCVIFEMCSLHPPF-QAKNYLELQTKIKNG 303
Score = 17.7 bits (34), Expect = 1.9
Identities = 5/10 (50%), Positives = 9/10 (90%)
Query: 751 YRSPKYEKGY 760
YRSP+ ++G+
Sbjct: 10 YRSPQQQQGH 19
Score = 16.9 bits (32), Expect = 3.2
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 899 IYDRMK 904
IYDRMK
Sbjct: 156 IYDRMK 161
Score = 16.9 bits (32), Expect = 3.2
Identities = 5/10 (50%), Positives = 7/10 (70%)
Query: 5 YDDGESRLNE 14
YDD + +NE
Sbjct: 184 YDDSDYNINE 193
Score = 15.8 bits (29), Expect = 7.2
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 725 YKYENKY 731
YK E+KY
Sbjct: 118 YKQEHKY 124
Lambda K H
0.314 0.130 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 924
Number of extensions: 40
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 6
Length of query: 1057
Length of database: 435
Length adjustment: 39
Effective length of query: 1018
Effective length of database: 396
Effective search space: 403128
Effective search space used: 403128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.6 bits)
S2: 28 (15.4 bits)